Stem-loop mmu-mir-153

Accession

MI0000175

Symbol

MGI: Mir153

Description

Mus musculus mmu-mir-153 precursor miRNA mir-153

Gene
family

RF00650; mir-153

Literature search

32 open access papers mention mmu-mir-153
(722 sentences)

Sequence

60735 reads, 810 reads per million, 47 experiments

cgguGUCAUUUUUGUGACGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauug
((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))

Structure

     -             GU       -a  aa 
cgguG UCAUUUUUGUGAC  UGCAGCU  gu  u
||||| |||||||||||||  |||||||  ||  a
guuaC AGUGAAAACACUG  ACGUUga  cg  u
     U             AU       cc  ag 

Annotation confidence Not enough data

Genome context

chr12: 117250817-117250885 [+]

Mature mmu-miR-153-5p

• Accession: MIMAT0016992
• Description: Mus musculus mmu-miR-153-5p mature miRNA
• Sequence: 5 - GUCAUUUUUGUGACGUUGCAGCU - 27
• Evidence: experimental ; Illumina [5]

Mature mmu-miR-153-3p

• Accession: MIMAT0000163
• Description: Mus musculus mmu-miR-153-3p mature miRNA
• Sequence: 44 - UUGCAUAGUCACAAAAGUGAUC - 65
• Evidence: experimental ; cloned [1-3], Illumina [4-5]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12007417
   Identification of tissue-specific microRNAs from mouse
   "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
   "Curr Biol (2002) 12:735-739


3. PubMed ID: 15538371
   A pancreatic islet-specific microRNA regulates insulin secretion
   "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
   "Nature (2004) 432:226-230


4. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


5. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009