miRBase entry: mmu-mir-153

Stem-loop mmu-mir-153


Accession
MI0000175
Symbol
MGI: Mir153
Description
Mus musculus mmu-mir-153 precursor miRNA mir-153
Gene
family?
RF00650; mir-153

Literature search
32 open access papers mention mmu-mir-153
(722 sentences)

Sequence

60735 reads, 1787 reads per million, 47 experiments
cgguGUCAUUUUUGUGACGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauug
((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))

Structure
     -             GU       -a  aa 
cgguG UCAUUUUUGUGAC  UGCAGCU  gu  u
||||| |||||||||||||  |||||||  ||  a
guuaC AGUGAAAACACUG  ACGUUga  cg  u
     U             AU       cc  ag 


Annotation confidence Not enough data
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Genome context
chr12: 117250817-117250885 [+]

Database links

Mature mmu-miR-153-5p

Accession MIMAT0016992
Description Mus musculus mmu-miR-153-5p mature miRNA
Sequence 5 - GUCAUUUUUGUGACGUUGCAGCU - 27
Evidence experimental
Illumina [5]
Database links
Predicted targets

Mature mmu-miR-153-3p

Accession MIMAT0000163
Description Mus musculus mmu-miR-153-3p mature miRNA
Sequence 44 - UUGCAUAGUCACAAAAGUGAUC - 65
Evidence experimental
cloned [1-3], Illumina [4-5]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12007417
    Identification of tissue-specific microRNAs from mouse
    "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
    "Curr Biol (2002) 12:735-739

  3. PubMed ID: 15538371
    A pancreatic islet-specific microRNA regulates insulin secretion
    "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
    "Nature (2004) 432:226-230

  4. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  5. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009