Stem-loop mmu-mir-30b

Accession

MI0000145

Symbol

MGI: Mir30b

Description

Mus musculus mmu-mir-30b precursor miRNA

Literature search

209 open access papers mention mmu-mir-30b
(1253 sentences)

Sequence

126905 reads, 676 reads per million, 107 experiments

cuaagccaaguuucaguucaUGUAAACAUCCUACACUCAGCUgucauacaugcguuggCUGGGAUGUGGAUGUUUACGUCagcugucuuggaguau
.((..(((((...(((((.((((((((((((.((((((((((..(........)..))))))).))))))))))))))).))))).)))))..)).

Structure

c  ag     uuu     c            U   -       gu aua 
 ua  ccaag   caguu aUGUAAACAUCC ACA CUCAGCU  c   c
 ||  |||||   ||||| |||||||||||| ||| |||||||  |    
 au  gguuc   gucga UGCAUUUGUAGG UGU GGGUCgg  g   a
u  ga     --u     C            -   A       uu cgu 

Annotation confidence High

Genome context

chr15: 68337415-68337510 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-30b

Mature mmu-miR-30b-5p

• Accession: MIMAT0000130
• Description: Mus musculus mmu-miR-30b-5p mature miRNA
• Sequence: 21 - UGUAAACAUCCUACACUCAGCU - 42
• Evidence: experimental ; cloned [1-3], Illumina [4-5]

Mature mmu-miR-30b-3p

• Accession: MIMAT0004524
• Description: Mus musculus mmu-miR-30b-3p mature miRNA
• Sequence: 59 - CUGGGAUGUGGAUGUUUACGUC - 80
• Evidence: experimental ; cloned [3], Illumina [4-5]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12007417
   Identification of tissue-specific microRNAs from mouse
   "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
   "Curr Biol (2002) 12:735-739


3. PubMed ID: 15538371
   A pancreatic islet-specific microRNA regulates insulin secretion
   "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
   "Nature (2004) 432:226-230


4. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


5. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009