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2 publications mentioning rno-mir-3068Open access articles that are associated with the species Rattus norvegicus and mention the gene name mir-3068. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary. |
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Other miRNAs from this paper: rno-mir-330, rno-mir-20a, rno-mir-10a, rno-mir-10b, rno-mir-25, rno-mir-29b-2, rno-mir-29b-1, rno-mir-93, rno-mir-103-2, rno-mir-103-1, rno-mir-128-1, rno-mir-128-2, rno-mir-133a, rno-mir-142, rno-mir-146a, rno-mir-206, rno-mir-1, rno-mir-133b, rno-mir-499, rno-mir-410, rno-mir-455, rno-mir-208b, rno-mir-149, rno-mir-29b-3, rno-mir-486
The most regulated genes from the MAPK pathway were: platelet derived growth factor receptor beta (PDGFRA), a target for miR-93-5p, 410-3p, and 128-3p; MAP kinase-interacting serine/threonine kinase 2 (MKNK2), a target for miR-93-5p and 128-3p; Nuclear factor of activated T-cells 3 (NFATE3), a target for miR-128-3p and 103-3p; transforming growth factor beta receptor 1 (TGFBR1), a target for miR-128-3p and 142-3p; and nemo like kinase (NLK), a target for miR-3068-3p and 410-3p (Figure 3B).
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The most regulated genes from MAPK pathway were: platelet derived growth factor receptor beta (PDGFRA), a target for miR-93-5p, 410-3p and 128-3p; MAP kinase-interacting serine/threonine kinase 2 (MKNK2), a target for miR-93-5p and 128-3p; Nuclear factor of activated T-cells 3 (NFATE3), a target for miR-128-3p and 103-3p; transforming growth factor beta receptor 1 (TGFBR1), a target for miR-128-3p and 142-3p; and nemo like kinase (NLK), a target for miR-3068-3p and 410-3p.
[score:12]
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Other miRNAs from this paper: mmu-let-7g, mmu-let-7i, mmu-let-7d, mmu-let-7a-1, mmu-let-7a-2, mmu-let-7b, mmu-let-7c-1, mmu-let-7c-2, mmu-let-7e, mmu-let-7f-1, mmu-let-7f-2, rno-let-7d, rno-let-7a-1, rno-let-7a-2, rno-let-7b, rno-let-7c-1, rno-let-7c-2, rno-let-7e, rno-let-7f-1, rno-let-7f-2, rno-let-7i, mmu-mir-1843a, mmu-mir-509, mmu-mir-1306, mmu-mir-1839, mmu-mir-3068, mmu-mir-1843b, rno-mir-1839, rno-mir-1843a, rno-mir-509, rno-mir-1306, mmu-let-7j, mmu-let-7k, rno-let-7g, rno-mir-1843b
After applying these structural criteria, 5 novel pre-miRNAs homologous to known miRNAs in other species were discovered and named as rno-mir-1839, rno-mir-3068, rno-mir-1843, rno-mir-509 and rno-mir-1306.
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The sequences and the secondary structures of these 5 novel rat homologous pre-miRNAs are shown in Figure 2. The single nucleotide extension isomirs of the mature* sequences had higher read counts than the mature* sequences in two miRNAs (rno-miR-3068-3p and rno-miR-1843-3p) (Figure 2c and 2e).
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The single nucleotide extension isomirs of the mature* sequences had higher read counts than the mature* sequences with perfect 2 nt 3′ overhang in two miRNAs (rno-miR-3068-3p and rno-miR-1843-3p).
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All miRNAs show a perfect 2 nt 3′ overhang, except rno-miR-3068-3p and rno-miR-1843-3p marked with (#).
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All Sequences of novel rat miRNAs are the same as those of other species except rno-miR-3068-5p, rno-miR-509-3p and rno-miR-1306-3p.
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rno-mir-3068.
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