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4 publications mentioning sbi-MIR437g

Open access articles that are associated with the species Sorghum bicolor and mention the gene name MIR437g. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 3
Other miRNAs from this paper: zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR160e, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, sbi-MIR172b, sbi-MIR172c, sbi-MIR172a, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR164b, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR172e, sbi-MIR319a, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR319a, zma-MIR319c, zma-MIR319b, zma-MIR319d, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR160f, sbi-MIR164c, sbi-MIR395f, sbi-MIR160f, sbi-MIR164d, sbi-MIR164e, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169l, sbi-MIR169m, sbi-MIR169n, sbi-MIR172d, sbi-MIR319b, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR172f, sbi-MIR5381, sbi-MIR5382, sbi-MIR5383, sbi-MIR5384, sbi-MIR5385, sbi-MIR5386, sbi-MIR5387a, sbi-MIR5388, sbi-MIR5389, sbi-MIR5387b
From all miRNAs whose expression could be detected in sorghum stems, two of them were found to be within introns of protein coding genes, these included miR172c and miR437g. [score:3]
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2
[+] score: 2
Other miRNAs from this paper: sbi-MIR166d, sbi-MIR166c, sbi-MIR166b, sbi-MIR166a, sbi-MIR172a, sbi-MIR156a, sbi-MIR156c, sbi-MIR156b, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR167a, sbi-MIR167b, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR396b, sbi-MIR396a, sbi-MIR396c, sbi-MIR399a, sbi-MIR399c, sbi-MIR399d, sbi-MIR399e, sbi-MIR399f, sbi-MIR399b, sbi-MIR399g, sbi-MIR156d, sbi-MIR164b, sbi-MIR166e, sbi-MIR167d, sbi-MIR167f, sbi-MIR167g, sbi-MIR167e, sbi-MIR167c, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR171b, sbi-MIR171d, sbi-MIR171a, sbi-MIR171c, sbi-MIR166f, sbi-MIR171e, sbi-MIR319a, sbi-MIR399h, sbi-MIR399i, sbi-MIR164c, sbi-MIR166g, sbi-MIR171f, sbi-MIR395f, sbi-MIR156e, sbi-MIR156f, sbi-MIR156g, sbi-MIR156h, sbi-MIR156i, sbi-MIR160f, sbi-MIR164d, sbi-MIR164e, sbi-MIR166h, sbi-MIR166i, sbi-MIR166j, sbi-MIR166k, sbi-MIR167h, sbi-MIR167i, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169l, sbi-MIR169m, sbi-MIR169n, sbi-MIR171g, sbi-MIR171h, sbi-MIR171i, sbi-MIR171j, sbi-MIR171k, sbi-MIR390, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR396d, sbi-MIR396e, sbi-MIR399j, sbi-MIR437a, sbi-MIR437b, sbi-MIR437c, sbi-MIR437d, sbi-MIR437e, sbi-MIR437f, sbi-MIR437i, sbi-MIR437j, sbi-MIR437k, sbi-MIR437l, sbi-MIR437m, sbi-MIR437n, sbi-MIR437o, sbi-MIR437p, sbi-MIR437q, sbi-MIR437r, sbi-MIR437s, sbi-MIR437t, sbi-MIR437u, sbi-MIR437v, sbi-MIR437w, sbi-MIR529, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR398, sbi-MIR399k, sbi-MIR5385, sbi-MIR5567, sbi-MIR5568a, sbi-MIR5568g, sbi-MIR5568b, sbi-MIR5568c, sbi-MIR6220, sbi-MIR437x, sbi-MIR6221, sbi-MIR6225, sbi-MIR5568d, sbi-MIR6230, sbi-MIR5568e, sbi-MIR5568f
Similarly, miRNA families, namely miR437, miR156g-h, miR2118d, miR5385, and miR6221 (denoted with the symbol “$” in Table 2) were identified first time in monocots. [score:1]
In the present study, we found monocot abundant miR156g-h, miR166c-i, miR167f-j, miR169b, miR171a-b, miR172a-c, miR319a-b, miR395, miR396a, miR437, miR529, miR2118a-b, miR2118d, miR2118e, miR2275, miR5385, and miR6221 (denoted with the symbol “@” in Table 2) which were not previously reported in sorghum. [score:1]
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3
[+] score: 2
miR437 precursors have similarity with Oryza sativa MITE-adh type A (2.5e [-17]) while miR1128 precursor is similar to O. glumipatula pangrangja MITE element (1.2e [-11]). [score:1]
Only miR1128 and all three miR437 precursors presented substantial similarity with known MITEs (Table 1). [score:1]
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4
[+] score: 1
This pri-miRNA, a miR437 precursor (SsMIR437a gene), has high similarity (score 416) to MITE-derived hairpin sequences (DNA/Stowaway) in the hairpin region, and the intron has high similarity to a LINE/RTE non-LTR retrotransposon (score 2091, Figure 3). [score:1]
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