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5 publications mentioning sbi-MIR164e

Open access articles that are associated with the species Sorghum bicolor and mention the gene name MIR164e. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 15
Further, in silico analysis for the presence of miRNA targets revealed presence of miR156, miR164, miR397, miR528, miR5566, and miR6230 target sites in 10 independent cell wall related genes (Supplementary Table 4). [score:5]
Further, Yu et al. (2015) reported miR164 and miR528 as stem specific miRNA whereas miR156 was up-regulated in the leaves at dough stage. [score:4]
miR156, miR164, and miR528 have been reported to be differentially expressed in stem and leaves during sugar accumulation in sweet sorghum (Yu et al., 2015). [score:3]
Six different miRNA families (miR156, miR164, miR397, miR528, miR5566, and miR6230) were identified to target these cell wall related genes. [score:3]
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2
[+] score: 13
Other miRNAs from this paper: sbi-MIR166d, sbi-MIR166c, sbi-MIR166b, sbi-MIR166a, sbi-MIR172a, sbi-MIR156a, sbi-MIR156c, sbi-MIR156b, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR167a, sbi-MIR167b, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR396b, sbi-MIR396a, sbi-MIR396c, sbi-MIR399a, sbi-MIR399c, sbi-MIR399d, sbi-MIR399e, sbi-MIR399f, sbi-MIR399b, sbi-MIR399g, sbi-MIR156d, sbi-MIR164b, sbi-MIR166e, sbi-MIR167d, sbi-MIR167f, sbi-MIR167g, sbi-MIR167e, sbi-MIR167c, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR171b, sbi-MIR171d, sbi-MIR171a, sbi-MIR171c, sbi-MIR166f, sbi-MIR171e, sbi-MIR319a, sbi-MIR399h, sbi-MIR399i, sbi-MIR164c, sbi-MIR166g, sbi-MIR171f, sbi-MIR395f, sbi-MIR156e, sbi-MIR156f, sbi-MIR156g, sbi-MIR156h, sbi-MIR156i, sbi-MIR160f, sbi-MIR164d, sbi-MIR166h, sbi-MIR166i, sbi-MIR166j, sbi-MIR166k, sbi-MIR167h, sbi-MIR167i, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169l, sbi-MIR169m, sbi-MIR169n, sbi-MIR171g, sbi-MIR171h, sbi-MIR171i, sbi-MIR171j, sbi-MIR171k, sbi-MIR390, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR396d, sbi-MIR396e, sbi-MIR399j, sbi-MIR437a, sbi-MIR437b, sbi-MIR437c, sbi-MIR437d, sbi-MIR437e, sbi-MIR437f, sbi-MIR437g, sbi-MIR437i, sbi-MIR437j, sbi-MIR437k, sbi-MIR437l, sbi-MIR437m, sbi-MIR437n, sbi-MIR437o, sbi-MIR437p, sbi-MIR437q, sbi-MIR437r, sbi-MIR437s, sbi-MIR437t, sbi-MIR437u, sbi-MIR437v, sbi-MIR437w, sbi-MIR529, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR398, sbi-MIR399k, sbi-MIR5385, sbi-MIR5567, sbi-MIR5568a, sbi-MIR5568g, sbi-MIR5568b, sbi-MIR5568c, sbi-MIR6220, sbi-MIR437x, sbi-MIR6221, sbi-MIR6225, sbi-MIR5568d, sbi-MIR6230, sbi-MIR5568e, sbi-MIR5568f
For instance, sbi-miR164 (targeted to NAC transcription factor) was found to be downregulated by drought stress at-lest in one genotype of sorghum. [score:6]
Similarly, all members of the sbi-miR399 and sbi-miR164 families targeted phosphate transporter (PHT), and NAC domain containing protein, respectively. [score:3]
Interplay of miR164, CUP−SHAPED COTYLEDON genes and LATERAL SUPPRESSOR controls axillary meristem formation in Arabidopsis thaliana. [score:3]
For instance, in our study, miR156 and miR164 families showed clear evidence for functional diversification. [score:1]
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3
[+] score: 11
For example, miR156 and miR529 were predicted to target genes that encode SBP-box transcription factors [58- 60], and miR164, miR169, miR171, miR172 and miR319 were reported to target No Apical Meristem (NAM) [61, 62], CCAAT -binding factor (CBF) [63, 64], GRAS transcription factor [65], APETALA2 Ethylene-Responsive Element Binding Proteins (AP2-EREBP) [66, 67] and Teosinite branched, Cycloidea, and PCF (TCP) [68, 69], respectively. [score:5]
For example, the expression levels of sit-miR156, sit-miR164, sit-miR166 and sit-miR167 were comparatively very high, and sit-miR160, sit-miR319, sit-miR390 and sit-miR394 were comparatively very low, in agreement with similar findings in other plants [21, 22, 80]. [score:3]
We noted that the sit-miR156, sit-miR164, sit-miR166, sit-miR167 and sit-miR172 families showed relatively higher expression (slightly over 1,000 RPM, on average) in one or more of the four tissues. [score:3]
[1 to 20 of 3 sentences]
4
[+] score: 3
Other miRNAs from this paper: zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR160e, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, sbi-MIR172b, sbi-MIR172c, sbi-MIR172a, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR164b, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR172e, sbi-MIR319a, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR319a, zma-MIR319c, zma-MIR319b, zma-MIR319d, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR160f, sbi-MIR164c, sbi-MIR395f, sbi-MIR160f, sbi-MIR164d, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169l, sbi-MIR169m, sbi-MIR169n, sbi-MIR172d, sbi-MIR319b, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR437g, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR172f, sbi-MIR5381, sbi-MIR5382, sbi-MIR5383, sbi-MIR5384, sbi-MIR5385, sbi-MIR5386, sbi-MIR5387a, sbi-MIR5388, sbi-MIR5389, sbi-MIR5387b
Although the expression difference of miR160, miR164 and miR319 between BTx623 and Rio was inherited in the F2, and thus of interest for further analysis, it was less than two fold; so we decided to focus on miR169, miR172 and miR395 instead. [score:3]
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5
[+] score: 1
Sixteen miRNA families were shown to be putatively present on chromosome 5A: two of them (miR164 and miR167) were found only in the short arm, three families (miR156, miR399 and miR2118) were found only in the long arm, while the remaining eleven families were found in both arms (Table 3). [score:1]
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