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8 publications mentioning bmo-mir-10

Open access articles that are associated with the species Bombyx mori and mention the gene name mir-10. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 24
The relatively high expression level suggested that bmo-miR-278, in company with synchronized expressions of bmo-miR-77, bmo-miR-10 and bmo-miR-14, may play a similar role in regulating energy metabolism at molting stage, compromising for the conflict of energy-hungry process and fasting behavior by targeting insulin receptor-like protein precursor (BIR), bombyxin, and BmCF1. [score:8]
Aside from EcR, bmo-miR-10 and bmo-miR-14 may together down-regulate the expression of Jhe, inducing juvenile hormone to accumulate slowly at late MLS for normal larva development after ecdysis. [score:7]
The expression patterns of bmo-miR-10 and bmo-miR-14 are very similar, and they also shared several common targets, such as ecdysone receptor (EcR), orphan nuclear receptor (E75), BmCF1, and Jhe. [score:5]
Stage-biased miRNAs, such as bmo-miR-92 at PDS, bmo-miR-10 at NLS and MLS, bmo-miR-iab-4-3p at DS, SS and PS, may play crucial roles in regulating development-related genes. [score:3]
Bmo-miR-10 and bmo-miR-14 showed a synchronized trend where a sharp increase at trachea appearing stage (TAS) (p = 0.0048 and 0.0031, respectively), NLS (p = 0.011 and 0.00007, respectively), and MLS (p = 0.012 and 0.0012, respectively). [score:1]
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2
[+] score: 13
The most abundantly expressed miRNAs in B. mori are also highly conserved miRNAs e. g, miR-1, miR-8, miR-10, let-7, miR-263a, miR276a, and miR-306 and were expressed in all four stages, albeit their expression levels vary across different developmental periods. [score:8]
miR-10* had a higher frequency than miR-10 in Drososphila [23, 74] and locust [31]. [score:1]
The specific accumulation of miR* sequences for miR-8, miR-10, miR-37, miR-281 and miR-965 was particularly striking in the silkworm (Table 3 and Figure 5). [score:1]
However, for several miRNAs i. e, miR-10, miR-33, miR-281 and miR-965, the counts of miR* species far exceeded those of their miR species (Table 3). [score:1]
These observations suggest that miR-10* tends to accumulate at a higher level. [score:1]
This implies a potential functional role for miR-10*, and possibly other miR* that tends to accumulate at significant levels. [score:1]
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3
[+] score: 10
In addition, miR-10-5p was also found to up-regulate in BmNPV infected silkworm larvae indicating that miR-10-5p may also play a role in BmNPV infection. [score:4]
Oral feeding experiments using synthetic miR-10-1a mimic can suppress the growth of S. exigua and increased mortality [34]. [score:3]
Spodoptera exigua miR-10-1a has been shown to be differentially expressed during the larval stages. [score:3]
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4
[+] score: 9
Other miRNAs from this paper: bmo-mir-184, bmo-mir-745, bmo-mir-3378
Taken together, these data suggest that the XLOC_010603 and XLOC_010759 transcripts overlapping with miR-10 and miR-iab-4 may function as miRNA precursors, playing an important role in the regulation of Hox gene expression. [score:4]
The 3’UTR of Scr genes has been conserved over hundreds of millions of years of evolution, suggesting that this region is likely the functional target site for miR-10 [74]. [score:3]
Boxed regions indicate miR-10 primary sequences. [score:1]
For example, tow gene loci XLOC_010603 and XLOC_010759 residing in the Hox gene cluster were determined to be precursors of miR-iab-4 and miR-10, respectively (Fig 4). [score:1]
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5
[+] score: 5
In paralog 1, both arms of bmo-mir-10 produced over a 10-fold greater number of mature molecules than did bmo-mir-993a and mir-993b. [score:1]
Nevertheless, some annotated miRNAs and highest reads were not derived from the same arms of the hairpin precursors, as illustrated by bmo-mir-10, bmo-mir-276, and bmo-mir-281 (Figure 3, Additional file 9). [score:1]
Both mir-10 and mir-993b were confirmed in the three libraries, but mir-993a was absent in the posterior silk gland. [score:1]
However, in the silkworm, a number of miRNA genes (mir-2a-1, mir-2b, mir-10, and mir-282) exhibited a similar number of sequence reads originating from the 5' and 3' arms of the miRNA hairpin precursors (5p and 3p, respectively) (Additional file 9*). [score:1]
The total reads of 9 miRstar sequences (miR-10*, miR-276*, miR-281*, miR-282*, miR-2a-1*, miR-965*, miR-993a*, miR-993b*, and miR-9b*) were heavily skewed toward the RNA hairpin arm containing annotated miRNAs in at least one library (Additional file 9, names in green). [score:1]
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6
[+] score: 1
Other miRNAs from this paper: dme-mir-2a-1, dme-mir-2a-2, dme-mir-2b-1, dme-mir-2b-2, dme-mir-9a, dme-mir-10, dme-mir-12, dme-mir-13a, dme-mir-13b-1, dme-mir-13b-2, dme-mir-276a, dme-mir-133, dme-mir-276b, dme-mir-210, dme-mir-31b, dme-mir-9c, dme-mir-306, dme-mir-9b, dme-mir-31a, dme-mir-309, dme-mir-316, dme-mir-317, dme-mir-2c, ame-mir-12, ame-mir-133, ame-mir-210, ame-mir-276, ame-mir-2-1, ame-mir-2-2, ame-mir-317, ame-mir-9a, ame-mir-9b, bmo-mir-9a, bmo-mir-276, bmo-mir-31, bmo-mir-71, ame-mir-10, ame-mir-137, ame-mir-13a, ame-mir-2-3, ame-mir-29b, ame-mir-31a, ame-mir-375, ame-mir-71, ame-mir-932, dme-mir-193, dme-mir-375, dme-mir-932, dme-mir-970, dme-mir-971, dme-mir-989, dme-mir-137, dme-mir-1006, dme-mir-1007, bmo-mir-2a-1, bmo-mir-2a-2, bmo-mir-2b, bmo-mir-13a, bmo-mir-13b, bmo-mir-133, bmo-mir-210, bmo-mir-317, tca-mir-2-3, tca-mir-2-1, tca-mir-2-2, tca-mir-10, tca-mir-12, tca-mir-13a, tca-mir-13b, tca-mir-31, tca-mir-71, tca-mir-133, tca-mir-137, tca-mir-210, tca-mir-276, tca-mir-317, tca-mir-932, tca-mir-9b, bmo-mir-12, bmo-mir-137, bmo-mir-932, bmo-mir-9b, tca-mir-9a, tca-mir-970, ame-mir-13b, ame-mir-1006, ame-mir-316, bmo-mir-970, lmi-mir-276, lmi-mir-210, lmi-mir-10, lmi-mir-9a, bmo-mir-9c, bmo-mir-306a, bmo-mir-989a, bmo-mir-316, bmo-mir-1175, bmo-mir-9d, bmo-mir-750, bmo-mir-375, bmo-mir-306b, api-mir-137, api-mir-10, api-mir-276, api-mir-13a, api-mir-210, api-mir-29, api-mir-2a, api-mir-2b, api-mir-2c, api-mir-316, api-mir-317, api-mir-71, api-mir-971, api-mir-9a, api-mir-9b, api-mir-306, api-mir-3049, bmo-mir-989b, ame-mir-1175, ame-mir-193, ame-mir-989, ame-mir-3049, ame-mir-971, ame-mir-3770, ame-mir-9c, ame-mir-306, ame-mir-750, tca-mir-9c, tca-mir-316, tca-mir-9d, tca-mir-309a, tca-mir-3049, tca-mir-375, tca-mir-29, tca-mir-1175, tca-mir-750, tca-mir-989, tca-mir-309b, tca-mir-193, tca-mir-6012, tca-mir-9e, ame-mir-6037, ame-mir-6012, ame-mir-2b, tca-mir-309c, tca-mir-971b
Blast approaches on the genome assembly and on small RNA-seq reads led to find three of them: MIR-317, MIR-316 and MIR-971, as well as a new Mir-10 gene. [score:1]
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7
[+] score: 1
Although most miRNAs are more abundant than their corresponding miRNA*s, there are exceptional cases, where bmo-miR-10, bmo-miR-276, bmo-miR-305, bmo-miR-33, and bmo-miR-34 are less abundant than their miRNA* counterparts. [score:1]
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8
[+] score: 1
The most abundant miRNA was bmo-miR-750 in all the 4 samples, which yielded 302954 counts, followed by bmo-miR-10 (210825 counts). [score:1]
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