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4 publications mentioning mtr-MIR393a

Open access articles that are associated with the species Medicago truncatula and mention the gene name MIR393a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

[+] score: 12
Other miRNAs from this paper: ath-MIR393a, ath-MIR393b, osa-MIR393a, osa-MIR393b, mtr-MIR393b
Chen Z. H. Bao M. L. Sun Y. Z. Yang Y. J. Xu X. H. Wang J. H. Han N. Bian H. W. Zhu M. Y. Regulation of auxin response by miR393 -targeted TRANSPORT INHIBITOR RESPONSE PROTEIN 1 is involved in normal development in Arabidopsis Plant Mol. [score:7]
ABA also induces expression of the microRNA, miR393, which cleaves transcripts for the auxin receptors, TIR1 and AFB2, thus reducing auxin signaling and inhibiting LR growth (Figure 2) [114]. [score:5]
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[+] score: 8
Other miRNAs from this paper: mtr-MIR160a, mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR395a, mtr-MIR395b, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR395c, mtr-MIR395d, mtr-MIR395e, mtr-MIR395f, mtr-MIR395g, mtr-MIR395h, mtr-MIR395i, mtr-MIR395j, mtr-MIR395l, mtr-MIR395m, mtr-MIR395n, mtr-MIR395o, mtr-MIR395k, mtr-MIR156b, mtr-MIR167a, mtr-MIR164a, mtr-MIR160b, mtr-MIR166b, mtr-MIR160c, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR390, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR393b, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR164b, mtr-MIR156h, mtr-MIR166f, mtr-MIR160d, mtr-MIR164c, mtr-MIR164d, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396a, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR160e, mtr-MIR399p, mtr-MIR1507, mtr-MIR1509a, mtr-MIR2118, mtr-MIR169k, mtr-MIR2590a, mtr-MIR2590b, mtr-MIR2590c, mtr-MIR2590d, mtr-MIR2590e, mtr-MIR2590f, mtr-MIR2592b, mtr-MIR2592c, mtr-MIR2592d, mtr-MIR2592e, mtr-MIR2592f, mtr-MIR2592i, mtr-MIR2592j, mtr-MIR2592o, mtr-MIR2592p, mtr-MIR2592q, mtr-MIR2592r, mtr-MIR2592s, mtr-MIR2597, mtr-MIR2111c, mtr-MIR2111d, mtr-MIR2111e, mtr-MIR2111g, mtr-MIR2111h, mtr-MIR2111i, mtr-MIR2111m, mtr-MIR2111n, mtr-MIR2111o, mtr-MIR2610a, mtr-MIR2610b, mtr-MIR169j, mtr-MIR1509b, mtr-MIR2619a, mtr-MIR2592a, mtr-MIR2592g, mtr-MIR2592h, mtr-MIR2592k, mtr-MIR2592l, mtr-MIR2592m, mtr-MIR2592n, mtr-MIR2111b, mtr-MIR2111j, mtr-MIR2111k, mtr-MIR2630a, mtr-MIR2630b, mtr-MIR2630c, mtr-MIR2630w, mtr-MIR2630x, mtr-MIR2630y, mtr-MIR2630d, mtr-MIR2630e, mtr-MIR2630f, mtr-MIR2630g, mtr-MIR2630h, mtr-MIR2630i, mtr-MIR2630j, mtr-MIR2630k, mtr-MIR2630l, mtr-MIR2630m, mtr-MIR2630n, mtr-MIR2630o, mtr-MIR2630p, mtr-MIR2630q, mtr-MIR2630r, mtr-MIR2630s, mtr-MIR2630t, mtr-MIR2630u, mtr-MIR2630v, mtr-MIR2645, mtr-MIR399q, mtr-MIR5205a, mtr-MIR5205b, mtr-MIR5205c, mtr-MIR5205d, mtr-MIR2592t, mtr-MIR2592u, mtr-MIR2592v, mtr-MIR2592w, mtr-MIR2592x, mtr-MIR2592y, mtr-MIR2592z, mtr-MIR2592ab, mtr-MIR2592ac, mtr-MIR2592ad, mtr-MIR2592ae, mtr-MIR2592af, mtr-MIR2592ah, mtr-MIR2592ai, mtr-MIR2592aj, mtr-MIR2592al, mtr-MIR2592am, mtr-MIR2592an, mtr-MIR2592ao, mtr-MIR2592ap, mtr-MIR2592aq, mtr-MIR2592ar, mtr-MIR2592as, mtr-MIR2592at, mtr-MIR2592au, mtr-MIR2592av, mtr-MIR2592aw, mtr-MIR2592ax, mtr-MIR2592ay, mtr-MIR2592az, mtr-MIR2592ba, mtr-MIR2592bb, mtr-MIR2592bc, mtr-MIR2592bd, mtr-MIR2592be, mtr-MIR2592bf, mtr-MIR2592bg, mtr-MIR2592bi, mtr-MIR2592bj, mtr-MIR2592bk, mtr-MIR482, mtr-MIR5241a, mtr-MIR5241b, mtr-MIR5241c, mtr-MIR2111l, mtr-MIR2111f, mtr-MIR160f, mtr-MIR171h, mtr-MIR399r, mtr-MIR156j, mtr-MIR2590g, mtr-MIR5283, mtr-MIR2590h, mtr-MIR2590i, mtr-MIR2590j, mtr-MIR5287a, mtr-MIR5287b, mtr-MIR2619b, mtr-MIR2592bl, mtr-MIR2592bm, mtr-MIR2592bn, mtr-MIR167b, mtr-MIR2111a, mtr-MIR396c, mtr-MIR171g, mtr-MIR530, mtr-MIR169i, mtr-MIR397, mtr-MIR7696a, mtr-MIR7696b, mtr-MIR7696c, mtr-MIR7696d, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t, mtr-MIR2592bo, mtr-MIR2592bp, mtr-MIR2592bq, mtr-MIR2592br
Many of them, like miR160, miR164, miR167, miR390 and miR393, directly or indirectly regulate genes related to auxin signaling [10]. [score:4]
Again, certain miRNAs already known to be involved in the regulation of symbiotic and pathogenic processes, such as miR169 variants [20], miR171h and other variants [22, 23], miR393 [16], miR396 [15], sly-miR482* and miR2118 [19], were found, suggesting co-regulatory roles for the newly discovered miRNAs present in those modules. [score:3]
In our analysis, only four passenger strand sequences of the conserved miR393, miR1507, miR2118 and miR7696 families were found in higher counts than their corresponding guide miRNAs (ptc-miR393a-3p, 204DVAAXX:1:47:672:376, 204DVAAXX:1:4:984:557 and mtr-miR7696b-3p, respectively; highlighted in pink in Additional file 2). [score:1]
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[+] score: 4
Navarro et al [29] showed that bacterial flagellin expression induced miR393 and F-box auxin receptor genes were regulated by miR393. [score:4]
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[+] score: 3
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR169a, osa-MIR171a, osa-MIR393a, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR398a, osa-MIR398b, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR156k, osa-MIR156l, osa-MIR166k, osa-MIR166l, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR171b, osa-MIR171c, osa-MIR171d, osa-MIR171e, osa-MIR171f, osa-MIR171g, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR171h, osa-MIR393b, osa-MIR408, osa-MIR172d, osa-MIR171i, osa-MIR167j, osa-MIR166m, osa-MIR166j, osa-MIR396e, mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR156b, mtr-MIR167a, mtr-MIR166b, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR398a, mtr-MIR172a, mtr-MIR393b, mtr-MIR398b, mtr-MIR168a, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR398c, mtr-MIR156h, mtr-MIR166f, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396a, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR399p, osa-MIR169r, sly-MIR166a, sly-MIR166b, sly-MIR167a, sly-MIR169a, sly-MIR169b, sly-MIR169c, sly-MIR169d, sly-MIR171a, sly-MIR171b, sly-MIR171c, sly-MIR171d, sly-MIR397, sly-MIR156a, sly-MIR156b, sly-MIR156c, sly-MIR172a, sly-MIR172b, sly-MIR399, osa-MIR827, osa-MIR396f, mtr-MIR2118, osa-MIR2118a, osa-MIR2118b, osa-MIR2118c, osa-MIR2118d, osa-MIR2118e, osa-MIR2118f, osa-MIR2118g, osa-MIR2118h, osa-MIR2118i, osa-MIR2118j, osa-MIR2118k, osa-MIR2118l, osa-MIR2118m, osa-MIR2118n, osa-MIR2118o, osa-MIR2118p, osa-MIR2118q, osa-MIR2118r, mtr-MIR169k, mtr-MIR169j, mtr-MIR399q, osa-MIR396g, osa-MIR396h, osa-MIR396d, osa-MIR5072, mtr-MIR4414a, mtr-MIR4414b, mtr-MIR482, mtr-MIR172b, mtr-MIR172c, mtr-MIR171h, mtr-MIR168b, mtr-MIR399r, mtr-MIR156j, sly-MIR482e, sly-MIR482a, mtr-MIR167b, mtr-MIR168c, mtr-MIR408, mtr-MIR396c, mtr-MIR171g, stu-MIR6024, sly-MIR6024, stu-MIR482c, stu-MIR482b, stu-MIR482a, stu-MIR482d, stu-MIR482e, sly-MIR482b, sly-MIR482c, stu-MIR6025, stu-MIR6026, sly-MIR6026, sly-MIR168a, sly-MIR168b, mtr-MIR169i, mtr-MIR172d, mtr-MIR397, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t, stu-MIR7980a, stu-MIR7983, stu-MIR8007a, stu-MIR8007b, stu-MIR7980b, stu-MIR399a, stu-MIR399b, stu-MIR399c, stu-MIR399d, stu-MIR399e, stu-MIR399f, stu-MIR399g, stu-MIR399h, stu-MIR3627, stu-MIR171b, stu-MIR166a, stu-MIR166b, stu-MIR166c, stu-MIR166d, stu-MIR171a, stu-MIR171c, stu-MIR399i, stu-MIR827, stu-MIR172b, stu-MIR172c, stu-MIR172a, stu-MIR172d, stu-MIR172e, stu-MIR156a, stu-MIR156b, stu-MIR156c, stu-MIR156d, stu-MIR171d, stu-MIR167c, stu-MIR167b, stu-MIR167a, stu-MIR167d, stu-MIR399j, stu-MIR399k, stu-MIR399l, stu-MIR399m, stu-MIR399n, stu-MIR399o, stu-MIR393, stu-MIR398a, stu-MIR398b, stu-MIR396, stu-MIR408a, stu-MIR408b, stu-MIR397, stu-MIR171e, stu-MIR156e, stu-MIR156f, stu-MIR156g, stu-MIR156h, stu-MIR156i, stu-MIR156j, stu-MIR156k, stu-MIR169a, stu-MIR169b, stu-MIR169c, stu-MIR169d, stu-MIR169e, stu-MIR169f, stu-MIR169g, stu-MIR169h, sly-MIR403, sly-MIR166c, sly-MIR156d, sly-MIR156e, sly-MIR396a, sly-MIR167b, sly-MIR482d, sly-MIR169e, sly-MIR396b, sly-MIR171e, sly-MIR172c, sly-MIR408, sly-MIR172d, sly-MIR827, sly-MIR393, sly-MIR398a, sly-MIR399b, sly-MIR6025, sly-MIR169f, sly-MIR171f
Arabidopsis Argonaute 2 regulates innate immunity via miRNA393(*) -mediated silencing of a Golgi-localized SNARE gene, MEMB12. [score:2]
Searching homologous sequences from other plant species in the miRBase revealed that four of the 19 miRNA families (miR408, miR398, miR393, and miR827) were ancient miRNA families, and their family members had been identified in more than 10 different plant species. [score:1]
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