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11 publications mentioning dme-mir-275

Open access articles that are associated with the species Drosophila melanogaster and mention the gene name mir-275. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 5
Examining the positions of the identified miRNAs in the B. mori genome, we identified two miRNA clusters (Figure 4): bmo-miR-2a-1/bmo-miR-2a-1*/bmo-miR-2a-2/bmo-miR-2b/bmo-miR-13a*/bmo-miR-13b; and bmo-miR-275/bmo-miR-305/bmo-miR-305*. [score:1]
a. bmo-miR-2a-1/bmo-miR-2a-1*/bmo-miR-2a-2/bmo-miR-2b/bmo-miR-13a*/bmo-miR-13b; b. bmo-miR-275/bmo-miR-305/bmo-miR-305*. [score:1]
The cluster bmo-miR-275/bmo-miR-305/bmo-miR-305* is also found in D. melanogaster, D. pseudoobscura and A. gambiae. [score:1]
Members of the bantam, mir-71, mir-275, mir-277, mir-279 miRNA families have a high degree of similarity in their precursor sequences. [score:1]
bmo-miR-275 and bmo-miR-305 belong to different miRNA families, mir-275 and mir-305. [score:1]
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2
[+] score: 5
Target sites for miR-275 and miR-306 limit the expression of the differentiation factor Bag of Marbles in male germ line stem cells (Eun et al., 2013). [score:5]
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3
[+] score: 5
Other miRNAs from this paper: hsa-mir-33a, hsa-mir-92a-1, hsa-mir-92a-2, dme-mir-1, dme-mir-8, dme-mir-11, hsa-mir-34a, hsa-mir-210, dme-mir-184, dme-mir-92a, dme-mir-276a, dme-mir-277, dme-mir-33, dme-mir-281-1, dme-mir-281-2, dme-mir-34, dme-mir-276b, dme-mir-210, dme-mir-92b, dme-bantam, dme-mir-309, dme-mir-317, hsa-mir-1-2, hsa-mir-184, hsa-mir-190a, hsa-mir-1-1, hsa-mir-34b, hsa-mir-34c, aga-bantam, aga-mir-1, aga-mir-184, aga-mir-210, aga-mir-275, aga-mir-276, aga-mir-277, aga-mir-281, aga-mir-317, aga-mir-8, aga-mir-92a, aga-mir-92b, hsa-mir-92b, hsa-mir-33b, hsa-mir-190b, dme-mir-190, dme-mir-957, dme-mir-970, dme-mir-980, dme-mir-981, dme-mir-927, dme-mir-989, dme-mir-252, dme-mir-1000, aga-mir-1174, aga-mir-1175, aga-mir-34, aga-mir-989, aga-mir-11, aga-mir-981, aga-mir-1889, aga-mir-1890, aga-mir-1891, aga-mir-190, aga-mir-927, aga-mir-970, aga-mir-957, aga-mir-1000, aga-mir-309, cqu-mir-1174, cqu-mir-281-1, cqu-mir-1, cqu-mir-275, cqu-mir-957, cqu-mir-277, cqu-mir-252-1, cqu-mir-970, cqu-mir-317-1, cqu-mir-981, cqu-mir-989, cqu-mir-1175, cqu-mir-276-1, cqu-mir-276-2, cqu-mir-276-3, cqu-mir-210, cqu-mir-92, cqu-mir-190-2, cqu-mir-190-1, cqu-mir-1000, cqu-mir-11, cqu-mir-8, cqu-bantam, cqu-mir-1891, cqu-mir-184, cqu-mir-1890, cqu-mir-980, cqu-mir-33, cqu-mir-2951, cqu-mir-2941-1, cqu-mir-2941-2, cqu-mir-2952, cqu-mir-1889, cqu-mir-309, cqu-mir-252-2, cqu-mir-281-2, cqu-mir-317-2, aga-mir-2944a-1, aga-mir-2944a-2, aga-mir-2944b, aga-mir-2945, aga-mir-33, aga-mir-980
miR-275 and miR-317 have no experimentally reported targets to date. [score:3]
Five miRNAs, miR-184, miR-275, miR-277, miR-276, and miR-92, were sequenced >500 times and were readily detectable in total RNA isolated from C7/10 cells (Figure 3A). [score:1]
albopictus C710 cells, these two species shared five out of the top ten most frequently occurring miRNAs: miR-184, miR-317, miR-277, miR-275, and miR-8 (Tables 1, 2). [score:1]
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4
[+] score: 3
Other miRNAs from this paper: dme-mir-34, dme-mir-9b, dme-mir-312
Interestingly, the E74 transcription unit displays features common to other potential LARK targets: it contains an A-rich element in the 3′UTR, the transcription unit contains a large ∼37-kb intron, and the 3′UTR contains binding sites for several miRNAs including miR-34, miR-9b, miR312, miR275, and miR-iab-4-5p. [score:3]
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5
[+] score: 3
Similarly, expression of dme-mir-305* from the 275~305 cluster does not correlate both to dme-mir-305 (r = 0.03) and dme-mir-275 (r = 0.16) (Figure 3c). [score:3]
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6
[+] score: 2
P. tepidariorum also contains panarthropod (mir-276 and mir-305), arthropod (iab-4/8 and mir-275), and chelicerate-specific (mir-3931) microRNAs (Rota-Stabelli et al. 2011; Tarver et al. 2013). [score:1]
Considering first the microRNAs that have unique mature sequences in P. tepidariorum, only mir-275 and mir-3477 exhibit differences in relative arm usage between P. tepidariorum and T. castaneum, (fig. 4 A). [score:1]
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[+] score: 2
For example, in A. aegypti, miR-275 functions during egg development [72]. [score:2]
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8
[+] score: 2
Mimics of miR-279-3p, miR-8-3-p, miR-275-3p, miR-34-3p and miR-304-5p (sequences of these miRNAs are listed in Table S1) as well as a negative control (NC) were synthesized by GenePharma (Shanghai, China). [score:1]
To characterize the interaction between the five miRNAs (miR-279-3p, miR-8-3-p, miR-275-3p, miR-34- 3p and miR-304-5p) and the 3′-UTR of bmfrn mRNA, the full length sequence of the 3′-UTR of bmfrn and the sequences of all miRNA candidates were submitted online to RNAhybrid, an algorithm taking into account the free energy level of RNA -RNA duplexes and degree of miRNA target sequence complementarity 21. [score:1]
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9
[+] score: 1
Other examples of clustered miRNAs or multicopy miRNAs include: novel miRNA C5152a antisense to C5152b; novel C5303 overlapping ame-mir-137; ame-mir-9b overlapping the ame-mir-79 locus, but on the opposite strand; ame-mir-12 near ame-mir-283; ame-mir-275 near ame-mir-305; ame-mir-277 near ame-mir-317 and ame-mir-34; C1504 near ame-mir-375; and ame-let-7 on the same scaffold as ame-mir-100. [score:1]
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10
[+] score: 1
Other miRNAs from this paper: dme-mir-7, dme-mir-184, dme-bantam, dme-mir-310
It has been shown that a specific miRNA, miR-275, represses Bam protein accumulation through bam 3′UTR in spermatocytes. [score:1]
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11
[+] score: 1
Other miRNAs from this paper: dme-mir-34, dme-mir-317
Similar changes were also found for miR-275-3p and miR-317-3p, with their Nbr -dependent isoforms being elevated with age (Fig.  7A), which was consistent with the increased activity of Nbr with age. [score:1]
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