Stem-loop sequence osa-MIR5834

AccessionMI0019854 (change log)
DescriptionOryza sativa miR5834 stem-loop
Literature search

1 open access papers mention osa-MIR5834
(1 sentences)

Stem-loop 
   uaa    -ca  c       --      g u    --uua     --g  uua  ucaagaa 
5'    cuug   ca ggaugua  gaaauu g gauu     cagag   cg   gc       u
      ||||   || |||||||  |||||| | ||||     |||||   ||   ||        
3'    gaac   gu ccuacau  uuuuaa u cuag     gucuc   gc   cg       u
   aaa    aaa  c       ug      g -    uauaa     aca  uua  uaugaua
Get sequence
Deep sequencing
1 reads, 0 reads per million, 1 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr6: 4758584-4758701 [-]
intergenic
Database links

Mature sequence osa-miR5834

Accession MIMAT0023309
Sequence

11 -  

acggauguagaaauuggugau

 - 31

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage" Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ Plant Cell. 23:4185-4207(2011).