Stem-loop sequence osa-MIR5340

AccessionMI0018522 (change log)
DescriptionOryza sativa miR5340 stem-loop
Stem-loop 
   g        a  c   a          ua      ug      u 
5'  aaaaugaa gu uga gauuuauuca  ucauca  aguaaa u
    |||||||| || ||| ||||||||||  ||||||  ||||||  
3'  uuuuauuu ca acu uuaaguaggu  aguagu  ucauuu a
   -        g  a   -          gc      gu      u
Get sequence
Deep sequencing
57 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MSU7) Overlapping transcripts
Chr2: 5683378-5683465 [-]
intergenic
Database links

Mature sequence osa-miR5340

Accession MIMAT0021413
Sequence

56 -  

ugaugacguggaugaauuucaaa

 - 78

Get sequence
Deep sequencing51 reads, 2 experiments
Evidence experimental; Illumina [1]
Database links

References

1
PMID:21791435 "Differential expression of the microRNAs in superior and inferior spikelets in rice (Oryza sativa)" Peng T, Lv Q, Zhang J, Li J, Du Y, Zhao Q J Exp Bot. 62:4943-4954(2011).