Stem-loop sequence osa-MIR5338

AccessionMI0018520 (change log)
DescriptionOryza sativa miR5338 stem-loop
Literature search

1 open access papers mention osa-MIR5338
(1 sentences)

Stem-loop 
   aauu      -----------     -cu   --      u   uucauuauuu           --  ug --u   u 
5'     ugcuuc           ugaag   uca  guuggu gua          ucuuuagcacu  au  g   uga a
       ||||||           |||||   |||  |||||| |||          |||||||||||  ||  |   ||| a
3'     acgggg           acuuc   agu  uaauca cgu          agagaucguga  ua  c   acu g
   aguu      uagaaaaaaaa     cuc   ua      u   ----------           ag  gu ccu   u
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr5: 15185719-15185851 [-]
intergenic
Database links

Mature sequence osa-miR5338

Accession MIMAT0021411
Sequence

11 -  

ugaagcuucaguugguuguau

 - 31

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:21791435 "Differential expression of the microRNAs in superior and inferior spikelets in rice (Oryza sativa)" Peng T, Lv Q, Zhang J, Li J, Du Y, Zhao Q J Exp Bot. 62:4943-4954(2011).