Stem-loop sequence osa-MIR2919

Accession

MI0013261 (change log)

Description

Oryza sativa miR2919 stem-loop

Stem-loop

   gcggggagccgaugggccgcg         -   g    -         agugggccgagccggcccaagagggaagggggggg 
5'                      ggagaggag aga agag ggagagggg                                   g
                        ||||||||| ||| |||| |||||||||                                   g
3'                      cuuuucuuu uuu uuuc ccuuuuucc                                   g
   ---------guuuauuauuaa         a   g    a         aaauauuuuucuuuuuaggauuuuucaggagaaag 

Deep sequencing

28 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (MSU7): Chr5: 9936879-9937038 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013261

Mature sequence osa-miR2919

• Accession: MIMAT0014050
• Sequence: 73 - aaggggggggggggaaaga - 91
• Evidence: experimental; cloned [1]

References

1. PMID:20131478 "Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses" Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK Mol Genet Genomics. 282:463-474(2009).