Stem-loop sequence osa-MIR2874

Accession

MI0013039 (change log)

Description

Oryza sativa miR2874 stem-loop

Stem-loop

          guuu          ga                    c     u 
5' acacuau    gcacuguuug  acuguucacauguugguucc ggcag a
   |||||||    ||||||||||  |||||||||||||||||||| ||||| a
3' ugugaua    ugugacaaac  ugacaaguguacaaucaagg ucguc a
          -aac          ug                    -     a 

Deep sequencing

29 reads, 0 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr8: 15598028-15598128 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013039

Mature sequence osa-miR2874

• Accession: MIMAT0013824
• Sequence: 69 - augugaacagugucaaacaguguc - 92
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00004DB3F9_39947

References

1. PMID:19903869 "Rice MicroRNA effector complexes and targets" Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y Plant Cell. 21:3421-3435(2009).