Stem-loop sequence osa-MIR2102

Accession

MI0010562 (change log)

Description

Oryza sativa miR2102 stem-loop

Literature search

2 open access papers mention osa-MIR2102
(3 sentences)

Stem-loop

      a  g  -    aa       ---   c     ccaccgcugccaugcggauga 
5' ccg ug ua gggc  gccgccg   ccg cacca                     c
   ||| || || ||||  |||||||   ||| |||||                     a
3' ggc gc gu ccug  cgguggc   ggc guggu                     a
      a  g  a    --       cuu   c     accuaggcuucucgaucuuca 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (MSU7): Chr5: 18250483-18250591 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0010562

Mature sequence osa-miR2102-5p

• Accession: MIMAT0010068
• Sequence: 10 - gggcaagccgccgccgccac - 29
• Evidence: experimental; Illumina [1]

Mature sequence osa-miR2102-3p

• Accession: MIMAT0010069
• Sequence: 75 - cauggugccgguuccgguggcg - 96
• Evidence: experimental; Illumina [1]

References

1. PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds" Xue LJ, Zhang JJ, Xue HW Nucleic Acids Res. 37:916-930(2009).