Stem-loop sequence osa-MIR169e

AccessionMI0001120 (change log)
DescriptionOryza sativa miR169e stem-loop
Gene family MIPF0000012; MIR169_1
Literature search

63 open access papers mention osa-MIR169e
(312 sentences)

   gcu      ---           ---           -  -  gu   --ugu    -  --     c    a 
5'    gguugu   guagccaagga   ugacuugccgg cc ug  uug     ucau ca  gcaau cagc u
      ||||||   |||||||||||   ||||||||||| || ||  |||     |||| ||  ||||| ||||  
3'    ccaaca   caucgguuucu   auugaacggcc gg ac  agc     agug gu  cguua gucg a
   ---      uua           uuu           a  u  gu   uagcu    u  gc     u    u 
Get sequence
Deep sequencing
5666 reads, 3.65e+03 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?

This sequence is a predicted paralogue of the previously identified miR169 family [1]. It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors.

Genome context
Coordinates (MSU7) Overlapping transcripts
Chr2: 31205866-31205997 [-]
Database links

Mature sequence osa-miR169e

Accession MIMAT0001050

11 - 


 - 31

Get sequence
Deep sequencing5664 reads, 2 experiments
Evidence by similarity; MI0000212
Database links