Stem-loop sequence osa-MIR1436

AccessionMI0007022 (change log)
DescriptionOryza sativa miR1436 stem-loop
Gene family MIPF0000344; MIR818
Literature search

13 open access papers mention osa-MIR1436
(45 sentences)

            --------                      a                                          u 
5' aguuuaugu        gcuacucccuccgucccauaau uuaaaaccuaggacuggauaggacguuucauaguacaaugac c
   |||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| a
3' ucaaauaua        ugaugagggaggcaggguauua aauuuuggauccugaccuauccugcaaaguaucauguuacug g
            uccaacuc                      c                                          a 
Get sequence
Deep sequencing
857 reads, 100 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MSU7) Overlapping transcripts
Chr1: 20316586-20316746 [-]
Database links

Mature sequence osa-miR1436

Accession MIMAT0005987

121 - 


 - 141

Get sequence
Deep sequencing421 reads, 2 experiments
Evidence experimental; cloned [1]
Database links


PMID:18312648 "Identification of novel and candidate miRNAs in rice by high throughput sequencing" Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK BMC Plant Biol. 8:25(2008).