Stem-loop sequence mmu-mir-8098

Accession

MI0026026 (change log)

Symbol

MGI:Mir8098

Description

Mus musculus miR-8098 stem-loop

Stem-loop

   gcc       -----------    a   u     c    uu   -     a      agcg   a   -u     ga a 
5'    ggcuugc           ggcu gug ggcgg ggug  ggu uuugg agccag    ggc cau  cccug  c g
      |||||||           |||| ||| ||||| ||||  ||| ||||| ||||||    ||| |||  |||||  |  
3'    ccgaacg           ccga cgc ucgcc ucgc  ccg aaacc ucgguc    cug gua  gggac  g g
   ---       cgaguccuagc    -   u     -    --   g     c      ---g   -   uc     -g c 

Deep sequencing

216 reads, 0 reads per million, 55 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr14: 62837721-62837857 [+]
• Overlapping transcripts:

  sense

  ENSMUST00000014691 ; Wdfy2-201; 3'UTR (exon 1)

  antisense

  ENSMUST00000181072 ; Gm26536-201; exon 2

Database links

• MGI:Mir8098
• miRBase Tracker:MI0026026

Mature sequence mmu-miR-8098

• Accession: MIMAT0031400
• Sequence: 77 - gcuauggucgcuggcucccaa - 97
• Deep sequencing: 156 reads, 46 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-8098
  • miRDB:mmu-miR-8098

References

1. PMID:23185045 "Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2" Polikepahad S, Corry DB Nucleic Acids Res. 41:1164-1177(2013).