Stem-loop sequence mmu-mir-1191b

Accession

MI0025021 (change log)

Symbol

MGI:Mir1191b

Description

Mus musculus miR-1191b stem-loop

Stem-loop

   --uca       g  c   aac   cuuca 
5'      ggcuaca ag gag   cug     a
        ||||||| || |||   |||      
3'      ccgaugu uc cuc   gac     a
   cgaac       a  a   --a   cacaa 

Deep sequencing

356 reads, 0 reads per million, 50 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr10: 81416240-81416297 [-]
• Overlapping transcripts:

  sense

  OTTMUST00000075329 ; Nfic-001; intron 2

  OTTMUST00000075330 ; Nfic-002; intron 2

  OTTMUST00000075332 ; Nfic-004; intron 2

  OTTMUST00000075333 ; Nfic-005; intron 2

  ENSMUST00000105321 ; Nfic-001; intron 2

  ENSMUST00000020461 ; Nfic-002; intron 2

  ENSMUST00000078185 ; Nfic-005; intron 2

  ENSMUST00000117966 ; Nfic-004; intron 2

Database links

• MGI:Mir1191b
• miRBase Tracker:MI0025021

Mature sequence mmu-miR-1191b-5p

• Accession: MIMAT0029866
• Sequence: 1 - ucaggcuacagagcgagaaccu - 22
• Deep sequencing: 314 reads, 44 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-1191b-5p
  • miRDB:mmu-miR-1191b-5p

Mature sequence mmu-miR-1191b-3p

• Accession: MIMAT0029867
• Sequence: 37 - agacucacuauguagcccaagc - 58
• Deep sequencing: 42 reads, 16 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-1191b-3p
  • miRDB:mmu-miR-1191b-3p

References

1. PMID:23325850 "Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues" Castellano L, Stebbing J Nucleic Acids Res. 41:3339-3351(2013).