Stem-loop sequence mmu-mir-7666

Accession

MI0025006 (change log)

Symbol

MGI:Mir7666

Description

Mus musculus miR-7666 stem-loop

Stem-loop

   gua     g   g   u    -  aga 
5'    gcccg gcg ugc uccc cg   g
      ||||| ||| ||| |||| ||    
3'    cgggc cgc acg aggg gc   u
   gag     a   g   u    u  cgc 

Deep sequencing

661 reads, 0 reads per million, 68 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr8: 40307875-40307929 [-]
• Overlapping transcripts:

  sense

  OTTMUST00000078563 ; Fgf20-002; intron 1

  ENSMUST00000118639 ; Fgf20-002; intron 1

  antisense

  OTTMUST00000078564 ; Efha2-001; 3'UTR (exon 1)

  ENSMUST00000068999 ; Micu3-001; 3'UTR (exon 1)

Database links

• MGI:Mir7666
• miRBase Tracker:MI0025006

Mature sequence mmu-miR-7666-5p

• Accession: MIMAT0029838
• Sequence: 1 - guagcccgggcggugcuucccc - 22
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7666-5p
  • miRDB:mmu-miR-7666-5p

Mature sequence mmu-miR-7666-3p

• Accession: MIMAT0029839
• Sequence: 37 - gaugcagcgcacgggcgag - 55
• Deep sequencing: 644 reads, 65 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7666-3p
  • miRDB:mmu-miR-7666-3p

References

1. PMID:23325850 "Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues" Castellano L, Stebbing J Nucleic Acids Res. 41:3339-3351(2013).