Stem-loop sequence mmu-mir-7665

Accession

MI0025005 (change log)

Symbol

MGI:Mir7665

Description

Mus musculus miR-7665 stem-loop

Stem-loop

   --a    aa      a  -aa      c       
5'    aggg  ggcagg ga   ggcugc uucaua 
      ||||  |||||| ||   |||||| ||||| u
3'    uccc  cugucc cu   ccgacg aggugg 
   aca    --      -  gga      a       

Deep sequencing

64 reads, 0 reads per million, 31 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr2: 120017517-120017579 [+]
• Overlapping transcripts:

  sense

  OTTMUST00000036198 ; Mapkbp1-001; intron 13

  ENSMUST00000066058 ; Mapkbp1-001; intron 13

Database links

• MGI:Mir7665
• miRBase Tracker:MI0025005

Mature sequence mmu-miR-7665-5p

• Accession: MIMAT0029836
• Sequence: 1 - aagggaaggcaggagaaaggcug - 23
• Deep sequencing: 61 reads, 29 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7665-5p
  • miRDB:mmu-miR-7665-5p

Mature sequence mmu-miR-7665-3p

• Accession: MIMAT0029837
• Sequence: 42 - agccaggucccuguccccuaca - 63
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; RNAseq [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7665-3p
  • miRDB:mmu-miR-7665-3p

References

1. PMID:23325850 "Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues" Castellano L, Stebbing J Nucleic Acids Res. 41:3339-3351(2013).