Stem-loop sequence mmu-mir-7217

Accession

MI0023712 (change log)

Symbol

MGI:Mir7217

Description

Mus musculus miR-7217 stem-loop

Stem-loop

   --aa    uau      a acaga     a  c 
5'     cuug   cuugug g     agggc cg c
       ||||   |||||| |     ||||| ||  
3'     gaac   gaacac c     ucccg gc u
   agaa    ---      c aagag     -  a 

Deep sequencing

21044 reads, 1.16e+03 reads per million, 24 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr17: 27355738-27355799 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mmu-mir-7217

• mmu-mir-7217: chr17: 27355738-27355799 [+]
• mmu-mir-7218: chr17: 27358097-27358155 [+]

Database links

• MGI:Mir7217
• miRBase Tracker:MI0023712

Mature sequence mmu-miR-7217-5p

• Accession: MIMAT0028402
• Sequence: 1 - aacuuguaucuugugagacagaagg - 25
• Deep sequencing: 5211 reads, 18 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7217-5p
  • miRDB:mmu-miR-7217-5p

Mature sequence mmu-miR-7217-3p

• Accession: MIMAT0028403
• Sequence: 41 - ugagaacccacaagcaagaaga - 62
• Deep sequencing: 15567 reads, 20 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7217-3p
  • miRDB:mmu-miR-7217-3p

References

1. PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).