Stem-loop sequence mmu-mir-7081

Accession

MI0022931 (change log)

Symbol

MGI:Mir7081

Description

Mus musculus miR-7081 stem-loop

Literature search

1 open access papers mention mmu-mir-7081
(1 sentences)

Stem-loop

   auuuca            cggcc     u   aaau  gu 
5'       gaggagggugcu     gggga uau    cu  g
         ||||||||||||     ||||| |||    ||  g
3'       cuccuccuaugg     ccccu aug    ga  u
   --gaca            ----u     u   --au  aa 

Deep sequencing

119 reads, 0 reads per million, 41 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr9: 20914090-20914164 [-]
• Overlapping transcripts:

  sense

  ENSMUST00000004202 ; Dnmt1-201; intron 28

  ENSMUST00000177754 ; Dnmt1-202; intron 28

  ENSMUST00000178110 ; Dnmt1-203; intron 28

Database links

• MGI:Mir7081
• miRBase Tracker:MI0022931

Mature sequence mmu-miR-7081-5p

• Accession: MIMAT0028068
• Sequence: 6 - agaggagggugcucggccggggauua - 31
• Deep sequencing: 10 reads, 9 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7081-5p
  • miRDB:mmu-miR-7081-5p

Mature sequence mmu-miR-7081-3p

• Accession: MIMAT0028069
• Sequence: 53 - uuccccugguauccuccucaca - 74
• Deep sequencing: 103 reads, 36 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-7081-3p
  • miRDB:mmu-miR-7081-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).