Stem-loop sequence hsa-mir-6822

AccessionMI0022667 (change log)
Symbol HGNC:MIR6822
DescriptionHomo sapiens miR-6822 stem-loop
Stem-loop 
   uggcc       --              c    
5'      cagggaa  ccaguuggggcuuc gcu 
        |||||||  |||||||||||||| || c
3'      gucccuu  ggucaaucucggag cgu 
   --gac       uc              a
Get sequence
Deep sequencing
162 reads, 3.12 reads per million, 32 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr3: 39138206-39138266 [+]
antisense
OTTHUMT00000342415 ; GORASP1-004; 3'UTR (exon 6)
OTTHUMT00000342414 ; GORASP1-003; exon 8
OTTHUMT00000254060 ; GORASP1-001; 3'UTR (exon 9)
OTTHUMT00000342418 ; GORASP1-007; 3'UTR (exon 9)
OTTHUMT00000342416 ; GORASP1-005; 3'UTR (exon 9)
ENST00000422110 ; GORASP1-004; 3'UTR (exon 6)
ENST00000441302 ; GORASP1-003; exon 8
ENST00000319283 ; GORASP1-001; 3'UTR (exon 9)
ENST00000453680 ; GORASP1-007; 3'UTR (exon 9)
ENST00000452389 ; GORASP1-005; 3'UTR (exon 9)
Database links

Mature sequence hsa-miR-6822-5p

Accession MIMAT0027544
Sequence

6 -  

cagggaaccaguuggggcuu

 - 25

Get sequence
Deep sequencing28 reads, 18 experiments
Evidence experimental; meta-analysis [1]
Predicted targets

Mature sequence hsa-miR-6822-3p

Accession MIMAT0027545
Sequence

37 -  

aggcucuaacuggcuuucccugca

 - 60

Get sequence
Deep sequencing7 reads, 6 experiments
Evidence experimental; meta-analysis [1]
Predicted targets

References

1
PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).