Stem-loop sequence hsa-mir-6761

Accession

MI0022606 (change log)

Symbol

HGNC:MIR6761

Description

Homo sapiens miR-6761 stem-loop

Literature search

1 open access papers mention hsa-mir-6761
(1 sentences)

Stem-loop

   u   cuc         ucgauggcaggugccuccg 
5'  cug   ugagagagc                   u
    |||   |||||||||                   g
3'  gac   acucucucg                   u
   -   cuc         ucgcauccucccaagccgu 

Deep sequencing

518 reads, 1.12 reads per million, 89 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr12: 111799834-111799905 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000404768 ; FAM109A-007; 3'UTR (exon 2)

  OTTHUMT00000404771 ; FAM109A-002; 3'UTR (exon 2)

  OTTHUMT00000404769 ; FAM109A-001; 3'UTR (exon 4)

  ENST00000547838 ; FAM109A-007; 3'UTR (exon 2)

  ENST00000548163 ; FAM109A-002; 3'UTR (exon 2)

  ENST00000450786 ; FAM109A-202; 3'UTR (exon 2)

  ENST00000392658 ; FAM109A-201; 3'UTR (exon 3)

  ENST00000361483 ; FAM109A-001; 3'UTR (exon 4)

Database links

• HGNC:MIR6761
• miRBase Tracker:MI0022606

Mature sequence hsa-miR-6761-5p

• Accession: MIMAT0027422
• Sequence: 6 - ucugagagagcucgauggcag - 26
• Deep sequencing: 484 reads, 76 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6761-5p
  • miRDB:hsa-miR-6761-5p

Mature sequence hsa-miR-6761-3p

• Accession: MIMAT0027423
• Sequence: 49 - uccuacgcugcucucucacucc - 70
• Deep sequencing: 32 reads, 23 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6761-3p
  • miRDB:hsa-miR-6761-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).