Stem-loop sequence hsa-mir-668

AccessionMI0003761 (change log)
Symbol HGNC:MIR668
DescriptionHomo sapiens miR-668 stem-loop
Gene family MIPF0000357; mir-668
Literature search

7 open access papers mention hsa-mir-668
(8 sentences)

Stem-loop 
       a   c   ---        g         a 
5' ggua gug gcc   ucggguga caugcacuu a
   |||| ||| |||   |||||||| ||||||||| u
3' ccau cac cgg   ggcucacu guauguggg g
       -   c   cuc        -         u
Get sequence
Deep sequencing
337 reads, 7.14 reads per million, 42 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCh38; GCA_000001405.15) Overlapping transcripts
chr14: 101055258-101055323 [+]
antisense
OTTHUMT00000414339 ; CTD-2644I21.1-001; intron 1
ENST00000554540 ; CTD-2644I21.1-001; intron 1
Clustered miRNAs
< 10kb from hsa-mir-668
hsa-mir-381chr14: 101045920-101045994 [+]
hsa-mir-487bchr14: 101046455-101046538 [+]
hsa-mir-539chr14: 101047321-101047398 [+]
hsa-mir-889chr14: 101047901-101047979 [+]
hsa-mir-544achr14: 101048658-101048748 [+]
hsa-mir-655chr14: 101049550-101049646 [+]
hsa-mir-487achr14: 101052446-101052525 [+]
hsa-mir-382chr14: 101054306-101054381 [+]
hsa-mir-134chr14: 101054687-101054759 [+]
hsa-mir-668chr14: 101055258-101055323 [+]
hsa-mir-485chr14: 101055419-101055491 [+]
hsa-mir-323bchr14: 101056219-101056300 [+]
hsa-mir-154chr14: 101059755-101059838 [+]
hsa-mir-496chr14: 101060573-101060674 [+]
hsa-mir-377chr14: 101062050-101062118 [+]
hsa-mir-541chr14: 101064495-101064578 [+]
Database links

Mature sequence hsa-miR-668-5p

Accession MIMAT0026636
Sequence

7 -  

ugcgccucgggugagcaug

 - 25

Get sequence
Deep sequencing3 reads, 1 experiments
Evidence experimental; Illumina [2]
Predicted targets

Mature sequence hsa-miR-668-3p

Accession MIMAT0003881
Sequence

43 -  

ugucacucggcucggcccacuac

 - 65

Get sequence
Deep sequencing331 reads, 40 experiments
Evidence experimental; cloned [1], Illumina [2]
Predicted targets

References

1
PMID:16954537 "Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis" Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E Genome Res. 16:1289-1298(2006).
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).