Stem-loop sequence hsa-mir-6715b

Accession

MI0022549 (change log)

Symbol

HGNC:MIR6715B

Description

Homo sapiens miR-6715b stem-loop

Literature search

2 open access papers mention hsa-mir-6715b
(31 sentences)

Stem-loop

   --       c           a        -   a  ca 
5'   gguugug ccacaggcacg cugguuug gca uu  g
     ||||||| ||||||||||| |||||||| ||| ||   
3'   ccgacgc gguguccgugu ggccaaac cgu aa  u
   ac       a           c        u   a  aa 

Deep sequencing

133 reads, 0 reads per million, 40 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr10: 112299612-112299688 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-6715b

• hsa-mir-6715a: chr10: 112299612-112299690 [+]
• hsa-mir-6715b: chr10: 112299612-112299688 [-]

Database links

• HGNC:MIR6715B
• miRBase Tracker:MI0022549

Mature sequence hsa-miR-6715b-5p

• Accession: MIMAT0025842
• Sequence: 11 - acaggcacgacugguuuggca - 31
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6715b-5p
  • miRDB:hsa-miR-6715b-5p

Mature sequence hsa-miR-6715b-3p

• Accession: MIMAT0025843
• Sequence: 46 - cucaaaccggcugugccugugg - 67
• Deep sequencing: 129 reads, 40 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6715b-3p
  • miRDB:hsa-miR-6715b-3p

References

1. PMID:22313525 "Deep sequencing analysis of small non-coding RNAs reveals the diversity of microRNAs and piRNAs in the human epididymis" Li Y, Wang HY, Wan FC, Liu FJ, Liu J, Zhang N, Jin SH, Li JY Gene. 497:330-335(2012).