Stem-loop sequence mmu-mir-30f

AccessionMI0021961 (change log)
Symbol MGI:Mir30f
DescriptionMus musculus miR-30f stem-loop
Literature search

161 open access papers mention mmu-mir-30f
(767 sentences)

Stem-loop 
   u     - -c   cg            --     a     ccucuca 
5'  ggcag c  ugc  cuguaaacaucc  gacug aagcu       a
    ||||| |  |||  ||||||||||||  ||||| |||||        
3'  ccguc g  acg  gacauuuguagg  cugac uucga       c
   c     a aa   au            aa     c     cauucca
Get sequence
Deep sequencing
2142 reads, 0 reads per million, 26 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr4: 120772606-120772697 [+]
antisense
OTTMUST00000020133 ; Nfyc-006; intron 3
OTTMUST00000020132 ; Nfyc-005; intron 4
OTTMUST00000020128 ; Nfyc-001; intron 5
OTTMUST00000020129 ; Nfyc-002; intron 5
OTTMUST00000020130 ; Nfyc-003; intron 5
ENSMUST00000134979 ; Nfyc-006; intron 3
ENSMUST00000136236 ; Nfyc-005; intron 4
ENSMUST00000097906 ; Nfyc-201; intron 4
ENSMUST00000043429 ; Nfyc-001; intron 5
ENSMUST00000118902 ; Nfyc-002; intron 5
ENSMUST00000120779 ; Nfyc-003; intron 5
Clustered miRNAs
< 10kb from mmu-mir-30f
mmu-mir-30c-1chr4: 120769534-120769622 [-]
mmu-mir-30fchr4: 120772606-120772697 [+]
mmu-mir-30echr4: 120772606-120772697 [-]
Database links

Mature sequence mmu-miR-30f

Accession MIMAT0025179
Sequence

16 -  

guaaacauccgacugaaagcuc

 - 37

Get sequence
Deep sequencing2140 reads, 25 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:22319597 "Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function" Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T PLoS One. 7:e30933(2012).