Stem-loop sequence mmu-mir-5617

AccessionMI0019185 (change log)
Symbol MGI:Mir5617
DescriptionMus musculus miR-5617 stem-loop
Literature search

1 open access papers mention mmu-mir-5617
(2 sentences)

Stem-loop 
   gua         --aa   u      uucc 
5'    agugagggc    gcc ucuggg    u
      |||||||||    ||| ||||||     
3'    ucacucucg    cgg ggaccc    a
   ---         acuc   c      uacc
Get sequence
Deep sequencing
38 reads, 0 reads per million, 13 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chrX: 20863126-20863182 [-]
sense
OTTMUST00000041608 ; Syn1-001; intron 11
ENSMUST00000115345 ; Syn1-001; intron 11
ENSMUST00000081893 ; Syn1-201; intron 11
Database links

Mature sequence mmu-miR-5617-5p

Accession MIMAT0022361
Sequence

1 -  

guaagugagggcaagccuucugg

 - 23

Get sequence
Deep sequencing32 reads, 12 experiments
Evidence not experimental
Database links
Predicted targets

Mature sequence mmu-miR-5617-3p

Accession MIMAT0022362
Sequence

37 -  

caggcggccucagcucucacu

 - 57

Get sequence
Deep sequencing6 reads, 4 experiments
Evidence not experimental
Predicted targets

References

1
PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).