Stem-loop sequence hsa-mir-4497

Accession

MI0016859 (change log)

Symbol

HGNC:MIR4497

Description

Homo sapiens miR-4497 stem-loop

Literature search

3 open access papers mention hsa-mir-4497
(4 sentences)

Stem-loop

   -    c    a   c          ------         ga  c cg 
5'  accu cggg cgg ugggcgccgg      cggccggga  uc g  c
    |||| |||| ||| ||||||||||      |||||||||  || |   
3'  uggg gccc gcc gcccgcggcc      gccggcccu  ag c  u
   c    c    -   u          cgcccg         -a  u cu 

Deep sequencing

11127 reads, 96.7 reads per million, 121 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr12: 109833348-109833436 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000403092 ; MYO1H-001; intron 3

  ENST00000431443 ; MYO1H-201; intron 2

  ENST00000310903 ; MYO1H-001; intron 3

Database links

• EntrezGene:MIR4497
• HGNC:MIR4497
• RNAcentral:URS000075D15E_9606
• miRBase Tracker:MI0016859

Mature sequence hsa-miR-4497

• Accession: MIMAT0019032
• Sequence: 3 - cuccgggacggcugggc - 19
• Deep sequencing: 11060 reads, 142 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00000A2C49_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4497
  • TargetScanVert:hsa-miR-4497
  • miRDB:hsa-miR-4497

References

1. PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).