Stem-loop sequence rno-mir-3577

AccessionMI0015449 (change log)
DescriptionRattus norvegicus miR-3577 stem-loop
Literature search

4 open access papers mention rno-mir-3577
(6 sentences)

Stem-loop 
      u   -  uuagu  a   u    -u   a                 ---------    c 
5' acg ggu cc     gg ggu ugcu  guu uaggggcuaagaggggc         cagg g
   ||| ||| ||     || ||| ||||  ||| |||||||||||||||||         ||||  
3' ugc cua gg     cc ucg acgg  cgg auucccgguucucccug         gucc u
      -   c  --uau  a   u    cu   -                 ucuacuacu    g
Get sequence
Deep sequencing
20516 reads, 1.46 reads per million, 479 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr10: 104340708-104340820 [+]
sense
ENSRNOT00000005684 ; 2310067B10Rik-201; exon 24
Database links

Mature sequence rno-miR-3577

Accession MIMAT0017863
Sequence

66 -  

ucugucccucuuggcccuuag

 - 86

Get sequence
Deep sequencing20503 reads, 479 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).