Stem-loop sequence mmu-mir-1947

AccessionMI0009937 (change log)
Symbol MGI:Mir1947
DescriptionMus musculus miR-1947 stem-loop
Literature search

2 open access papers mention mmu-mir-1947
(8 sentences)

   --  aca   ug       ac         g      -gc  a 
5'   ga   agg  guggagg  gagcuagcu agugcu   ag c
     ||   |||  |||||||  ||||||||| ||||||   || a
3'   cu   ucc  uaccucc  cucgaucga ucacga   uc c
   aa  -cg   cg       cu         g      gaa  u 
Get sequence
Deep sequencing
3499 reads, 0 reads per million, 87 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr16: 33105361-33105445 [+]
OTTMUST00000066593 ; Lmln-001; intron 13
ENSMUST00000023497 ; Lmln-001; intron 13
OTTMUST00000094178 ; RP24-422I18.4-001; intron 1
ENSMUST00000105610 ; Gm17106-001; intron 1
Database links

Mature sequence mmu-miR-1947-5p

Accession MIMAT0009413
Previous IDsmmu-miR-1947

15 - 


 - 36

Get sequence
Deep sequencing3490 reads, 87 experiments
Evidence experimental; Illumina [1-2]
Database links
Predicted targets

Mature sequence mmu-miR-1947-3p

Accession MIMAT0017343
Previous IDsmmu-miR-1947*

51 - 


 - 72

Get sequence
Deep sequencing4 reads, 3 experiments
Evidence experimental; Illumina [2]
Predicted targets


PMID:18849523 "In-depth characterization of the microRNA transcriptome in a leukemia progression model" Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK Genome Res. 18:1787-1797(2008).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).