Stem-loop sequence hsa-mir-3186

Accession

MI0014229 (change log)

Symbol

HGNC:MIR3186

Description

Homo sapiens miR-3186 stem-loop

Literature search

1 open access papers mention hsa-mir-3186
(1 sentences)

Stem-loop

        gc        c  g     g  ua        -c     
5' agccu  gguuccaa ag cgucu uc  cguggcuu  aacc 
   |||||  |||||||| || ||||| ||  ||||||||  ||| a
3' ucggg  ccaagguu uc guaga ag  gcacugaa  uuga 
        ga        -  g     g  gc        ac     

Deep sequencing

40 reads, 0 reads per million, 8 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr17: 81451104-81451188 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR3186
• HGNC:MIR3186
• RNAcentral:URS000075F01B_9606
• miRBase Tracker:MI0014229

Mature sequence hsa-miR-3186-5p

• Accession: MIMAT0015067
• Sequence: 16 - caggcgucugucuacguggcuu - 37
• Deep sequencing: 12 reads, 7 experiments
• Evidence: experimental; Illumina [1-2]
• Predicted targets:
  • TargetMiner:hsa-miR-3186-5p
  • TargetScanVert:hsa-miR-3186-5p
  • miRDB:hsa-miR-3186-5p
  • microrna.org:hsa-miR-3186-5p

Mature sequence hsa-miR-3186-3p

• Accession: MIMAT0015068
• Sequence: 53 - ucacgcggagagauggcuuug - 73
• Deep sequencing: 27 reads, 2 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00004CFC54_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3186-3p
  • TargetScanVert:hsa-miR-3186-3p
  • miRDB:hsa-miR-3186-3p
  • microrna.org:hsa-miR-3186-3p

References

1. PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
2. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).