Stem-loop sequence rno-mir-876

Accession

MI0012605 (change log)

Description

Rattus norvegicus miR-876 stem-loop

Gene family

MIPF0000430; mir-876

Stem-loop

   --   ug         u  c  ug         au  aa 
5'   aag  cuguggauu cu ug  aaucaccau  ca  u
     |||  ||||||||| || ||  |||||||||  ||  c
3'   uuc  gauacuuaa ga ac  uugguggug  gu  u
   ac   gu         u  a  gu         gu  aa 

Deep sequencing

6 reads, 0 reads per million, 6 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Rnor_6.0; GCA_000001895.4): chr5: 52461646-52461724 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir876
• miRBase Tracker:MI0012605

Mature sequence rno-miR-876

• Accession: MIMAT0012843
• Sequence: 9 - uggauuucucugugaaucacca - 30
• Deep sequencing: 2 reads, 2 experiments
• Evidence: not experimental
• Predicted targets:
  • TargetScanVert:rno-miR-876
  • miRDB:rno-miR-876
  • microrna.org:rno-miR-876

References

1. PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).