Stem-loop sequence rno-mir-628

Accession

MI0012598 (change log)

Description

Rattus norvegicus miR-628 stem-loop

Gene family

MIPF0000529; mir-628

Literature search

2 open access papers mention rno-mir-628
(4 sentences)

Stem-loop

   agcuguugugucgc       u    a   a     g       gcaa 
5'               uuccuca gcug cau uuuac agagggu    u
                 ||||||| |||| ||| ||||| |||||||     
3'               ggggagu ugac gug gaaug ucuucca    u
   -------------u       -    g   a     g       auac 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Rnor_6.0; GCA_000001895.4): chr8: 79679458-79679541 [+]
• Overlapping transcripts:

  sense

  ENSRNOT00000039176 ; Ccpg1-201; intron 5

Database links

• EntrezGene:Mir628
• miRBase Tracker:MI0012598

Mature sequence rno-miR-628

• Accession: MIMAT0012836
• Sequence: 21 - augcugacauauuuacgagagg - 42
• Evidence: not experimental
• Predicted targets:
  • TargetScanVert:rno-miR-628
  • miRDB:rno-miR-628
  • microrna.org:rno-miR-628

References

1. PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).