Stem-loop sequence rno-mir-504

Accession

MI0012592 (change log)

Description

Rattus norvegicus miR-504 stem-loop

Gene family

MIPF0000437; mir-504

Literature search

5 open access papers mention rno-mir-504
(52 sentences)

Stem-loop

   ---    -            g     a    -g    gaa 
5'    cugu ugggagacccug ucugc cucu  ucug   a
      |||| |||||||||||| ||||| ||||  ||||    
3'    gaca acccuuugggac ggacg gagg  agac   c
   gga    u            g     a    ga    auu 

Deep sequencing

50374 reads, 13.3 reads per million, 428 experiments

Confidence

Annotation confidence: high

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Database links

• EntrezGene:Mir504
• miRBase Tracker:MI0012592

Mature sequence rno-miR-504

• Accession: MIMAT0012830
• Sequence: 9 - agacccuggucugcacucuguc - 30
• Deep sequencing: 50074 reads, 428 experiments
• Evidence: not experimental
• Predicted targets:
  • TargetScanVert:rno-miR-504
  • miRDB:rno-miR-504
  • microrna.org:rno-miR-504

References

1. PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).