Stem-loop sequence mmu-mir-1981

AccessionMI0009992 (change log)
Symbol MGI:Mir1981
DescriptionMus musculus miR-1981 stem-loop
Literature search

4 open access papers mention mmu-mir-1981
(5 sentences)

   ---g       ug  c     cg    cu   g ug     u 
5'     uaaaggc  gg uuaga  uggc  uug g  uggaa g
       |||||||  || |||||  ||||  ||| |  ||||| c
3'     guuuccg  cc aaucu  accg  aau u  gccuu a
   gaca       gu  c     --    cc   g uu     c 
Get sequence
Deep sequencing
157702 reads, 206 reads per million, 104 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr1: 184822407-184822488 [-]
OTTMUST00000088664 ; Mosc2-009; intron 1
OTTMUST00000088661 ; Mosc2-006; intron 2
OTTMUST00000088662 ; Mosc2-007; intron 2
OTTMUST00000088663 ; Mosc2-008; intron 2
OTTMUST00000088659 ; Mosc2-004; intron 4
OTTMUST00000088656 ; Mosc2-001; intron 5
OTTMUST00000088658 ; Mosc2-003; intron 5
ENSMUST00000161341 ; Marc2-009; intron 1
ENSMUST00000161359 ; Marc2-006; intron 2
ENSMUST00000162261 ; Marc2-008; intron 2
ENSMUST00000162866 ; Marc2-007; intron 2
ENSMUST00000159293 ; Marc2-004; intron 4
ENSMUST00000068725 ; Marc2-001; intron 5
ENSMUST00000161821 ; Marc2-003; intron 5
Database links

Mature sequence mmu-miR-1981-5p

Accession MIMAT0009458
Previous IDsmmu-miR-1981

1 - 


 - 24

Get sequence
Deep sequencing154032 reads, 103 experiments
Evidence experimental; Illumina [1,3]
Database links
Predicted targets

Mature sequence mmu-miR-1981-3p

Accession MIMAT0017351
Previous IDsmmu-miR-1981*

60 - 


 - 80

Get sequence
Deep sequencing3668 reads, 98 experiments
Evidence experimental; 454 [2], Illumina [3]
Database links
Predicted targets


PMID:18923076 "Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs" Babiarz JE, Ruby JG, Wang Y, Bartel DP, Blelloch R Genes Dev. 22:2773-2785(2008).
PMID:20668074 "Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68" Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H J Virol. 84:10266-10275(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).