Stem-loop sequence mmu-mir-1199

AccessionMI0006307 (change log)
Symbol MGI:Mir1199
DescriptionMus musculus miR-1199 stem-loop
Gene family MIPF0001659; mir-1199
Literature search

3 open access papers mention mmu-mir-1199
(15 sentences)

   ----------------agccu cg           -- u     uc           g   agga      
5'                      g  ccggagccggg  g cugag  ccggucgcgcg gcg    acuca 
                        |  |||||||||||  | |||||  ||||||||||| |||    |||| u
3'                      c  ggccucggccc  c gacuc  ggccggcgugc cgu    ugagu 
   aggucccgcgcgccgucgccu au           gg u     gu           g   ----      
Get sequence
Deep sequencing
992 reads, 4.55 reads per million, 44 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr8: 84011515-84011633 [-]
Clustered miRNAs
< 10kb from mmu-mir-1199
mmu-mir-1199chr8: 84011515-84011633 [-]
mmu-mir-8111chr8: 84005628-84005764 [+]
Database links

Mature sequence mmu-miR-1199-5p

Accession MIMAT0005860
Previous IDsmmu-miR-1199

21 - 


 - 40

Get sequence
Deep sequencing907 reads, 37 experiments
Evidence experimental; 454 [1], Illumina [2]
Database links
Predicted targets

Mature sequence mmu-miR-1199-3p

Accession MIMAT0017333
Previous IDsmmu-miR-1199*

65 - 


 - 85

Get sequence
Deep sequencing73 reads, 18 experiments
Evidence experimental; Illumina [2]
Predicted targets


PMID:17989215 "RNA sequence analysis defines Dicer's role in mouse embryonic stem cells" Calabrese JM, Seila AC, Yeo GW, Sharp PA Proc Natl Acad Sci U S A. 104:18097-18102(2007).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).