Stem-loop sequence rno-mir-484

AccessionMI0006151 (change log)
DescriptionRattus norvegicus miR-484 stem-loop
Gene family MIPF0000219; mir-484
Literature search

6 open access papers mention rno-mir-484
(12 sentences)

   ------gcaugca    a     ggcggggccucgcggccc 
5'              ggga ggggg                  u
                |||| |||||                   
3'              cccu ccccu                  g
   aaacuccaaauag    -     gacucggacugcuccguc 
Get sequence
Deep sequencing
19170 reads, 1.64 reads per million, 488 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr10: 27845-27921 [-]
chr10: 908408-908484 [-]
Database links

Mature sequence rno-miR-484

Accession MIMAT0005319

46 - 


 - 67

Get sequence
Deep sequencing18887 reads, 488 experiments
Evidence experimental; cloned [1], SOLiD [2]
Predicted targets


PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).