Stem-loop sequence mmu-mir-503

AccessionMI0003538 (change log)
Symbol MGI:Mir503
DescriptionMus musculus miR-503 stem-loop
Gene family MIPF0000183; mir-503
Literature search

49 open access papers mention mmu-mir-503
(459 sentences)

        ua    c            g   u a  gu 
5' ugccc  gcag gggaacaguacu cag g gu  u
   |||||  |||| |||||||||||| ||| | ||  u
3' auggg  cguc ccuuuguuauga guc c cg  g
        uc    a            g   - -  ug 
Get sequence
Deep sequencing
204874 reads, 1.34e+03 reads per million, 105 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].

Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chrX: 53053984-53054054 [-]
Clustered miRNAs
< 10kb from mmu-mir-503
mmu-mir-322chrX: 53054255-53054349 [-]
mmu-mir-503chrX: 53053984-53054054 [-]
mmu-mir-351chrX: 53053255-53053353 [-]
mmu-mir-542chrX: 53049403-53049487 [-]
mmu-mir-450a-2chrX: 53048299-53048367 [-]
mmu-mir-450a-1chrX: 53048154-53048244 [-]
mmu-mir-450bchrX: 53047997-53048078 [-]
Database links

Mature sequence mmu-miR-503-5p

Accession MIMAT0003188
Previous IDsmmu-miR-503

6 - 


 - 28

Get sequence
Deep sequencing190444 reads, 103 experiments
Evidence experimental; cloned [1,4-5], MPSS [2], miRAP-cloned [3], Illumina [6-7]
Database links
Predicted targets

Mature sequence mmu-miR-503-3p

Accession MIMAT0004790
Previous IDsmmu-miR-503*

47 - 


 - 68

Get sequence
Deep sequencing14341 reads, 99 experiments
Evidence experimental; cloned [5], Illumina [6-7]
Database links
Predicted targets


PMID:16274478 "Identification of clustered microRNAs using an ab initio prediction method" Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M BMC Bioinformatics. 6:267(2005).
PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).
PMID:16973894 "Mouse microRNA profiles determined with a new and sensitive cloning method" Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H Nucleic Acids Res. 34:e115(2006).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).