Stem-loop sequence hsa-mir-324

Accession

MI0000813 (change log)

Symbol

HGNC:MIR324

Description

Homo sapiens miR-324 stem-loop

Gene family

MIPF0000165; mir-324

Literature search

65 open access papers mention hsa-mir-324
(208 sentences)

Stem-loop

   cu      gc     c   u c   a     u   u  aaag 
5'   gacuau  cuccc gca c ccu gggca ugg gu    c
     ||||||  ||||| ||| | ||| ||||| ||| ||     
3'   cugaug  ggggg cgu g gga cccgu acc ca    u
   --      uu     u   c u   c     c   -  gagg 

Deep sequencing

77053 reads, 211 reads per million, 159 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr17: 7223297-7223379 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000440693 ; NEURL4-010; intron 1

  OTTHUMT00000440668 ; NEURL4-005; intron 20

  OTTHUMT00000440657 ; NEURL4-004; intron 20

  OTTHUMT00000440658 ; NEURL4-003; intron 20

  OTTHUMT00000255435 ; NEURL4-002; intron 21

  OTTHUMT00000255434 ; NEURL4-001; intron 21

  ENST00000572029 ; NEURL4-010; intron 1

  ENST00000573186 ; NEURL4-005; intron 20

  ENST00000570460 ; NEURL4-004; intron 20

  ENST00000571887 ; NEURL4-003; intron 20

  ENST00000315614 ; NEURL4-002; intron 21

  ENST00000399464 ; NEURL4-001; intron 21

Database links

• EntrezGene:MIR324
• HGNC:MIR324
• RNAcentral:URS000075CFD7_9606
• miRBase Tracker:MI0000813

Mature sequence hsa-miR-324-5p

• Accession: MIMAT0000761
• Sequence: 16 - cgcauccccuagggcauuggug - 37
• Deep sequencing: 52157 reads, 159 experiments
• Evidence: experimental; cloned [4-5]
• Database links:
  • RNAcentral:URS000005481D_9606
• Predicted targets:
  • TargetMiner:hsa-miR-324-5p
  • TargetScanVert:hsa-miR-324-5p
  • miRDB:hsa-miR-324-5p
  • microrna.org:hsa-miR-324-5p

Mature sequence hsa-miR-324-3p

• Accession: MIMAT0000762
• Sequence: 50 - cccacugccccaggugcugcugg - 72
• Deep sequencing: 24881 reads, 157 experiments
• Evidence: experimental; cloned [3-5]
• Database links:
  • RNAcentral:URS00004390F6_9606
• Predicted targets:
  • TargetMiner:hsa-miR-324-3p
  • TargetScanVert:hsa-miR-324-3p
  • miRDB:hsa-miR-324-3p
  • microrna.org:hsa-miR-324-3p

References

1. PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).
2. PMID:15634332 "New human and mouse microRNA genes found by homology search" Weber MJ FEBS J. 272:59-73(2005).
3. PMID:15800047 "Kaposi's sarcoma-associated herpesvirus expresses an array of viral microRNAs in latently infected cells" Cai X, Lu S, Zhang Z, Gonzalez CM, Damania B, Cullen BR Proc Natl Acad Sci U S A. 102:5570-5575(2005).
4. PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
5. PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).