Stem-loop sequence mmu-mir-362

AccessionMI0000763 (change log)
Symbol MGI:Mir362
DescriptionMus musculus miR-362 stem-loop
Gene family MIPF0000209; mir-362
Literature search

8 open access papers mention mmu-mir-362
(9 sentences)

   cuc           acc        aa   u  u 
5'    gaauccuugga   uaggugug  ugc gc u
      |||||||||||   ||||||||  ||| ||  
3'    cuuaggaacuu   guccacac  acg ug c
   aaa           ---        -a   -  a 
Get sequence
Deep sequencing
44986 reads, 58.3 reads per million, 103 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chrX: 7241982-7242046 [-]
OTTMUST00000039775 ; Clcn5-003; intron 2
OTTMUST00000039776 ; Clcn5-004; intron 3
OTTMUST00000039777 ; Clcn5-005; intron 3
ENSMUST00000128319 ; Clcn5-003; intron 2
ENSMUST00000115746 ; Clcn5-004; intron 3
ENSMUST00000132126 ; Clcn5-005; intron 3
Clustered miRNAs
< 10kb from mmu-mir-362
mmu-mir-532chrX: 7248402-7248497 [-]
mmu-mir-188chrX: 7247989-7248056 [-]
mmu-mir-362chrX: 7241982-7242046 [-]
mmu-mir-501chrX: 7241243-7241351 [-]
mmu-mir-500chrX: 7237683-7237774 [-]
Database links

Mature sequence mmu-miR-362-5p

Accession MIMAT0000706
Previous IDsmmu-miR-362

5 - 


 - 28

Get sequence
Deep sequencing25265 reads, 102 experiments
Evidence experimental; cloned [1,3], MPSS [2], Illumina [4-5]
Database links
Predicted targets

Mature sequence mmu-miR-362-3p

Accession MIMAT0004684

42 - 


 - 63

Get sequence
Deep sequencing19721 reads, 103 experiments
Evidence experimental; cloned [3], Illumina [4-5]
Database links
Predicted targets


PMID:16274478 "Identification of clustered microRNAs using an ab initio prediction method" Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M BMC Bioinformatics. 6:267(2005).
PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).