Stem-loop sequence mmu-mir-361

Accession

MI0000761 (change log)

Symbol

MGI:Mir361

Description

Mus musculus miR-361 stem-loop

Gene family

MIPF0000172; mir-361

Literature search

20 open access papers mention mmu-mir-361
(303 sentences)

Stem-loop

        uu         --u  a    u    agua 
5' gaagc  aucagaauc   cc gggg acuu    u
   |||||  |||||||||   || |||| ||||     
3' cuuug  uagucuuag   gg cccc ugaa    u
        uu         ugu  a    c    aagu 

Deep sequencing

73321 reads, 196 reads per million, 106 experiments

Confidence

Annotation confidence: high

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chrX: 113074824-113074893 [-]
• Overlapping transcripts:

  sense

  OTTMUST00000044723 ; Chm-002; intron 8

  OTTMUST00000044722 ; Chm-001; intron 9

  OTTMUST00000044724 ; Chm-003; intron 9

  ENSMUST00000113388 ; Chm-002; intron 8

  ENSMUST00000026607 ; Chm-001; intron 9

  ENSMUST00000135821 ; Chm-003; intron 9

Database links

• EntrezGene:Mirn361
• MGI:Mir361
• RNAcentral:URS00006FD929_10090
• miRBase Tracker:MI0000761

Mature sequence mmu-miR-361-5p

• Accession: MIMAT0000704
• Previous IDs: mmu-miR-361
• Sequence: 6 - uuaucagaaucuccagggguac - 27
• Deep sequencing: 63246 reads, 106 experiments
• Evidence: experimental; cloned [1-2], Illumina [3,5]
• Database links:
  • RNAcentral:URS00000CF1D2_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-361-5p
  • miRDB:mmu-miR-361-5p
  • microrna.org:mmu-miR-361-5p

Mature sequence mmu-miR-361-3p

• Accession: MIMAT0017075
• Previous IDs: mmu-miR-361*
• Sequence: 43 - ucccccaggugugauucugauuugu - 67
• Deep sequencing: 10075 reads, 103 experiments
• Evidence: experimental; 454 [4], Illumina [5]
• Database links:
  • RNAcentral:URS00001C248E_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-361-3p
  • miRDB:mmu-miR-361-3p

References

1. PMID:15538371 "A pancreatic islet-specific microRNA regulates insulin secretion" Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M Nature. 432:226-230(2004).
2. PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
3. PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
4. PMID:20668074 "Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68" Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H J Virol. 84:10266-10275(2010).
5. PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).