Stem-loop sequence mmu-mir-350

AccessionMI0000640 (change log)
Symbol MGI:Mir350
DescriptionMus musculus miR-350 stem-loop
Gene family MIPF0000245; mir-350
Literature search

9 open access papers mention mmu-mir-350
(36 sentences)

   agaugccuug      c   a  -      c   c      -     gugag 
5'           cuccua aag gu aaagug aug gcuuug ggaca     g
             |||||| ||| || |||||| ||| |||||| |||||     a
3'           gaggau uuc ca uuucac uac cgaaac cuugu     a
   -----guuga      -   c  c      a   c      a     aauaa 
Get sequence
Deep sequencing
38325 reads, 189 reads per million, 106 experiments
Confidence Annotation confidence: high
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Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MI0000639) - its expression was later independently verified in mouse [2]. The sequence reported in [1] contains a 5' terminal A residue, which conflicts with the precursor sequence shown here. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr1: 176772325-176772423 [-]
ENSMUST00000057037 ; Cep170-201; intron 8
Database links

Mature sequence mmu-miR-350-5p

Accession MIMAT0017040
Previous IDsmmu-miR-350*

24 - 


 - 42

Get sequence
Deep sequencing3912 reads, 97 experiments
Evidence experimental; 454 [5], Illumina [6]
Database links
Predicted targets

Mature sequence mmu-miR-350-3p

Accession MIMAT0000605
Previous IDsmmu-miR-350

61 - 


 - 82

Get sequence
Deep sequencing34406 reads, 106 experiments
Evidence experimental; cloned [2-3], Illumina [4,6]
Database links
Predicted targets


PMID:14691248 "Identification of many microRNAs that copurify with polyribosomes in mammalian neurons" Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G Proc Natl Acad Sci U S A. 101:360-365(2004).
PMID:15538371 "A pancreatic islet-specific microRNA regulates insulin secretion" Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M Nature. 432:226-230(2004).
PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20668074 "Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68" Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H J Virol. 84:10266-10275(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).