miRBase entry: mdo-mir-7371k

Stem-loop mdo-mir-7371k


Accession
MI0040967
Description
Monodelphis domestica mdo-mir-7371k precursor miRNA


Sequence

405 reads, 24 reads per million, 4 experiments
AGUUGUACCAGAUGCUCGAUUUUcuagauucugugaAACGUUGCGUCUUGUACAAUUGu
((((((((.((((((.((.((((.(((...))).))))))..)))))).))))))))..

Structure
--        C      -U  A    c   a 
  AGUUGUAC AGAUGC  CG UUUU uag  
  |||||||| ||||||  || |||| ||| u
  UUAACAUG UCUGCG  GC AAag guc  
uG        U      UU  -    u   u 


Annotation confidence Not enough data
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Genome context
chrX: 40486320-40486378 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from mdo-mir-7371k
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7371k-5p

Accession MIMAT0050415
Description Monodelphis domestica mdo-miR-7371k-5p mature miRNA
Sequence 1 - AGUUGUACCAGAUGCUCGAUUUU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7371k-3p

Accession MIMAT0050416
Description Monodelphis domestica mdo-miR-7371k-3p mature miRNA
Sequence 37 - AACGUUGCGUCUUGUACAAUUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973