miRBase entry: mdo-mir-7371q

Stem-loop mdo-mir-7371q


Accession
MI0040965
Description
Monodelphis domestica mdo-mir-7371q precursor miRNA


Sequence

223 reads, 13 reads per million, 5 experiments
AUUUGGACAAGGUGCUCUGUUUuguggauugucccaAAAAGAGCAUCUUGUCCAUAGAg
...(((((((((((((((.(((((.(((...))))))))))))))))))))))).....

Structure
--AUU               G     u   u 
     UGGACAAGGUGCUCU UUUug gga  
     ||||||||||||||| ||||| ||| u
     ACCUGUUCUACGAGA AAAac ccu  
gAGAU               -     -   g 


Annotation confidence Not enough data
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Genome context
chrX: 40479473-40479531 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from mdo-mir-7371q
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7371q-5p

Accession MIMAT0050411
Description Monodelphis domestica mdo-miR-7371q-5p mature miRNA
Sequence 1 - AUUUGGACAAGGUGCUCUGUUU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7371q-3p

Accession MIMAT0050412
Description Monodelphis domestica mdo-miR-7371q-3p mature miRNA
Sequence 37 - AAAAGAGCAUCUUGUCCAUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973