miRBase entry: mdo-mir-7386p

Stem-loop mdo-mir-7386p


Accession
MI0040962
Description
Monodelphis domestica mdo-mir-7386p precursor miRNA


Sequence

84 reads, 5 reads per million, 4 experiments
AUGUGGAAAAGGUCCUCCAUUuuguggauuguuccaAAAAGAGGCCCUUGUCCAUAGA
.((((((.((((.((((..((((.((((....)))))))))))).)))).))))))..

Structure
-A      A    U    CA    g    u 
  UGUGGA AAGG CCUC  UUuu ugga u
  |||||| |||| ||||  |||| ||||  
  AUACCU UUCC GGAG  AAAA accu g
AG      G    C    --    -    u 


Annotation confidence Not enough data
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Genome context
chrX: 40471895-40471952 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from mdo-mir-7386p
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7386p-5p

Accession MIMAT0050405
Description Monodelphis domestica mdo-miR-7386p-5p mature miRNA
Sequence 1 - AUGUGGAAAAGGUCCUCCAUU - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-7386p-3p

Accession MIMAT0050406
Description Monodelphis domestica mdo-miR-7386p-3p mature miRNA
Sequence 37 - AAAAGAGGCCCUUGUCCAUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973