miRBase entry: mdo-mir-1545g-3

Stem-loop mdo-mir-1545g-3


Accession
MI0040955
Description
Monodelphis domestica mdo-mir-1545g-3 precursor miRNA


Sequence

2195 reads, 58 reads per million, 5 experiments
AGUGUCCUGGGAUAGAUAGGAGAuccccuugcaauccCCCUUUCCAUCCCGGGCAUUGGu
((((.((((((((.((.(((.(((.........)))..))).)).))))))))))))...

Structure
---    U        A  U   -A   ccc 
   AGUG CCUGGGAU GA AGG  GAu   c
   |||| |||||||| || |||  |||   u
   UUAC GGGCCCUA CU UCC  cua   u
uGG    -        C  U   Cc   acg 


Annotation confidence High
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Genome context
chrX: 13975864-13975923 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from mdo-mir-1545g-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-1545g-3p

Accession MIMAT0050389
Description Monodelphis domestica mdo-miR-1545g-3p mature miRNA
Sequence 38 - CCCUUUCCAUCCCGGGCAUUGG - 59
Evidence experimental
Illumina [1]

Mature mdo-miR-1545g-3-5p

Accession MIMAT0050396
Description Monodelphis domestica mdo-miR-1545g-3-5p mature miRNA
Sequence 1 - AGUGUCCUGGGAUAGAUAGGAGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973