Stem-loop mdo-mir-1545g-2

Accession

MI0040954

Description

Monodelphis domestica mdo-mir-1545g-2 precursor miRNA

Sequence

3239 reads, 82 reads per million, 5 experiments

AGUGUCCUGGGAUAGAUAGGCGaucgccuugcaauccCCCUUUCCAUCCCGGGCAUUGGu
((((.((((((((.((.(((.(((.((...)).)))..))).)).))))))))))))...

Structure

---    U        A  U   -C   c  c 
   AGUG CCUGGGAU GA AGG  Gau gc  
   |||| |||||||| || |||  ||| || u
   UUAC GGGCCCUA CU UCC  cua cg  
uGG    -        C  U   Cc   a  u 

Annotation confidence High

Genome context

chrX: 13958257-13958316 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-1545g-2

Mature mdo-miR-1545g-5p

• Accession: MIMAT0050388
• Description: Monodelphis domestica mdo-miR-1545g-5p mature miRNA
• Sequence: 1 - AGUGUCCUGGGAUAGAUAGGCG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545g-3p

• Accession: MIMAT0050389
• Description: Monodelphis domestica mdo-miR-1545g-3p mature miRNA
• Sequence: 38 - CCCUUUCCAUCCCGGGCAUUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973