miRBase entry: mdo-mir-1545e-2

Stem-loop mdo-mir-1545e-2


Accession
MI0040950
Description
Monodelphis domestica mdo-mir-1545e-2 precursor miRNA


Sequence

375 reads, 15 reads per million, 5 experiments
AGUGUCCUGGGAUAGAUAGGugaucccuuugcaauccUCCUUUCCAUCCUGGGCAUUGG
(((((((.(((((.((.(((.(((.........)))..))).)).))))))))))))..

Structure
--       U     A  U   -u   ccc 
  AGUGUCC GGGAU GA AGG  gau   u
  ||||||| ||||| || |||  |||   u
  UUACGGG UCCUA CU UCC  cua   u
GG       -     C  U   Uc   acg 


Annotation confidence High
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Genome context
chrX: 13935990-13936048 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from mdo-mir-1545e-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-1545e-5p

Accession MIMAT0050390
Description Monodelphis domestica mdo-miR-1545e-5p mature miRNA
Sequence 1 - AGUGUCCUGGGAUAGAUAGG - 20
Evidence experimental
Illumina [1]

Mature mdo-miR-1545e-3p

Accession MIMAT0050391
Description Monodelphis domestica mdo-miR-1545e-3p mature miRNA
Sequence 38 - UCCUUUCCAUCCUGGGCAUUGG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973