miRBase entry: mdo-mir-1545d-1

Stem-loop mdo-mir-1545d-1


Accession
MI0040947
Description
Monodelphis domestica mdo-mir-1545d-1 precursor miRNA


Sequence

1560 reads, 30 reads per million, 5 experiments
UGUGCCCUGGGAUAGAUAAGUGAucucuuuccuuucCCUUUUCUAUCCAUGGCACUGGu
.(((((...(((((((.(((.((...........)).))).)))))))..)))))....

Structure
---U     CUG       U   U  ucuc 
    GUGCC   GGAUAGA AAG GA    u
    |||||   ||||||| ||| ||    u
    CACGG   CCUAUCU UUC cu    u
uGGU     -UA       U   C  uucc 


Annotation confidence High
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Genome context
chrX: 13926550-13926608 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from mdo-mir-1545d-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-1545d-5p

Accession MIMAT0050386
Description Monodelphis domestica mdo-miR-1545d-5p mature miRNA
Sequence 1 - UGUGCCCUGGGAUAGAUAAGUGA - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-1545d-3p

Accession MIMAT0050387
Description Monodelphis domestica mdo-miR-1545d-3p mature miRNA
Sequence 37 - CCUUUUCUAUCCAUGGCACUGG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973